Protein–RNA interactions for Protein: Q96M42

LINC00479, Putative uncharacterized protein encoded by LINC00479, humanhuman

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00479Q96M42 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC14.83□□□□□ -0.04
LINC00479Q96M42 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC14.83□□□□□ -0.04
LINC00479Q96M42 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LINC00479Q96M42 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LINC00479Q96M42 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LINC00479Q96M42 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
LINC00479Q96M42 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
LINC00479Q96M42 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
LINC00479Q96M42 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
LINC00479Q96M42 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
LINC00479Q96M42 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LINC00479Q96M42 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LINC00479Q96M42 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
LINC00479Q96M42 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LINC00479Q96M42 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC14.83□□□□□ -0.04
LINC00479Q96M42 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
LINC00479Q96M42 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC14.83□□□□□ -0.04
LINC00479Q96M42 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LINC00479Q96M42 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LINC00479Q96M42 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
LINC00479Q96M42 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LINC00479Q96M42 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LINC00479Q96M42 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LINC00479Q96M42 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LINC00479Q96M42 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LINC00479Q96M42 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
LINC00479Q96M42 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LINC00479Q96M42 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
LINC00479Q96M42 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LINC00479Q96M42 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
LINC00479Q96M42 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LINC00479Q96M42 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LINC00479Q96M42 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LINC00479Q96M42 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
LINC00479Q96M42 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC14.82□□□□□ -0.04
LINC00479Q96M42 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LINC00479Q96M42 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
LINC00479Q96M42 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LINC00479Q96M42 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LINC00479Q96M42 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LINC00479Q96M42 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC14.82□□□□□ -0.04
LINC00479Q96M42 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LINC00479Q96M42 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LINC00479Q96M42 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LINC00479Q96M42 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LINC00479Q96M42 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LINC00479Q96M42 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC14.82□□□□□ -0.04
LINC00479Q96M42 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LINC00479Q96M42 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LINC00479Q96M42 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
LINC00479Q96M42 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
LINC00479Q96M42 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC14.81□□□□□ -0.04
LINC00479Q96M42 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LINC00479Q96M42 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
LINC00479Q96M42 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
LINC00479Q96M42 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LINC00479Q96M42 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LINC00479Q96M42 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LINC00479Q96M42 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC14.81□□□□□ -0.04
LINC00479Q96M42 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
LINC00479Q96M42 AC141586.3-201ENST00000562166 1838 ntBASIC14.81□□□□□ -0.04
LINC00479Q96M42 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LINC00479Q96M42 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC14.81□□□□□ -0.04
LINC00479Q96M42 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LINC00479Q96M42 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
LINC00479Q96M42 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LINC00479Q96M42 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
LINC00479Q96M42 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
LINC00479Q96M42 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC14.81□□□□□ -0.04
LINC00479Q96M42 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LINC00479Q96M42 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC14.81□□□□□ -0.04
LINC00479Q96M42 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LINC00479Q96M42 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
LINC00479Q96M42 AC079598.2-202ENST00000546624 1451 ntBASIC14.81□□□□□ -0.04
LINC00479Q96M42 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
LINC00479Q96M42 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LINC00479Q96M42 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC14.81□□□□□ -0.04
LINC00479Q96M42 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LINC00479Q96M42 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
LINC00479Q96M42 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC14.8□□□□□ -0.04
LINC00479Q96M42 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LINC00479Q96M42 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LINC00479Q96M42 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
LINC00479Q96M42 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC14.8□□□□□ -0.04
LINC00479Q96M42 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LINC00479Q96M42 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC14.8□□□□□ -0.04
LINC00479Q96M42 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
LINC00479Q96M42 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LINC00479Q96M42 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LINC00479Q96M42 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LINC00479Q96M42 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC14.8□□□□□ -0.04
LINC00479Q96M42 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
LINC00479Q96M42 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
LINC00479Q96M42 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LINC00479Q96M42 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
LINC00479Q96M42 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
LINC00479Q96M42 HYI-206ENST00000372434 1025 ntTSL 5 BASIC14.8□□□□□ -0.04
LINC00479Q96M42 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LINC00479Q96M42 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC14.8□□□□□ -0.04
LINC00479Q96M42 UBE2DNL-204ENST00000602536 740 ntBASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms