Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RTN4IP1Q8WWV3 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RTN4IP1Q8WWV3 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RTN4IP1Q8WWV3 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
RTN4IP1Q8WWV3 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
RTN4IP1Q8WWV3 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC16.33■□□□□ 0.21
RTN4IP1Q8WWV3 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
RTN4IP1Q8WWV3 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.21
RTN4IP1Q8WWV3 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
RTN4IP1Q8WWV3 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC16.33■□□□□ 0.21
RTN4IP1Q8WWV3 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC16.33■□□□□ 0.21
RTN4IP1Q8WWV3 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
RTN4IP1Q8WWV3 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC16.33■□□□□ 0.2
RTN4IP1Q8WWV3 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
RTN4IP1Q8WWV3 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC16.33■□□□□ 0.2
RTN4IP1Q8WWV3 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
RTN4IP1Q8WWV3 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC16.33■□□□□ 0.2
RTN4IP1Q8WWV3 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC16.33■□□□□ 0.2
RTN4IP1Q8WWV3 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC16.33■□□□□ 0.2
RTN4IP1Q8WWV3 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC16.33■□□□□ 0.2
RTN4IP1Q8WWV3 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC16.33■□□□□ 0.2
RTN4IP1Q8WWV3 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RTN4IP1Q8WWV3 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RTN4IP1Q8WWV3 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RTN4IP1Q8WWV3 PTBP1P-201ENST00000554374 1601 ntBASIC16.33■□□□□ 0.2
RTN4IP1Q8WWV3 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
RTN4IP1Q8WWV3 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RTN4IP1Q8WWV3 AL138781.2-201ENST00000617896 1843 ntBASIC16.33■□□□□ 0.2
RTN4IP1Q8WWV3 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RTN4IP1Q8WWV3 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RTN4IP1Q8WWV3 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RTN4IP1Q8WWV3 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RTN4IP1Q8WWV3 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RTN4IP1Q8WWV3 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RTN4IP1Q8WWV3 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
RTN4IP1Q8WWV3 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RTN4IP1Q8WWV3 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RTN4IP1Q8WWV3 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RTN4IP1Q8WWV3 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RTN4IP1Q8WWV3 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC16.32■□□□□ 0.2
RTN4IP1Q8WWV3 GPX1P1-201ENST00000388829 606 ntBASIC16.32■□□□□ 0.2
RTN4IP1Q8WWV3 SLC29A4P1-201ENST00000398760 971 ntBASIC16.32■□□□□ 0.2
RTN4IP1Q8WWV3 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RTN4IP1Q8WWV3 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC16.32■□□□□ 0.2
RTN4IP1Q8WWV3 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC16.32■□□□□ 0.2
RTN4IP1Q8WWV3 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
RTN4IP1Q8WWV3 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC16.32■□□□□ 0.2
RTN4IP1Q8WWV3 TK2-208ENST00000545043 1120 ntTSL 2 BASIC16.32■□□□□ 0.2
RTN4IP1Q8WWV3 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC16.32■□□□□ 0.2
RTN4IP1Q8WWV3 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC16.32■□□□□ 0.2
RTN4IP1Q8WWV3 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RTN4IP1Q8WWV3 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
RTN4IP1Q8WWV3 BRWD1-AS2-201ENST00000603064 1028 ntBASIC16.32■□□□□ 0.2
RTN4IP1Q8WWV3 WT1-AS_3.1-201ENST00000613262 234 ntBASIC16.32■□□□□ 0.2
RTN4IP1Q8WWV3 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC16.32■□□□□ 0.2
RTN4IP1Q8WWV3 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC16.32■□□□□ 0.2
RTN4IP1Q8WWV3 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RTN4IP1Q8WWV3 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RTN4IP1Q8WWV3 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RTN4IP1Q8WWV3 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
RTN4IP1Q8WWV3 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
RTN4IP1Q8WWV3 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC16.31■□□□□ 0.2
RTN4IP1Q8WWV3 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RTN4IP1Q8WWV3 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RTN4IP1Q8WWV3 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
RTN4IP1Q8WWV3 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RTN4IP1Q8WWV3 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC16.31■□□□□ 0.2
RTN4IP1Q8WWV3 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RTN4IP1Q8WWV3 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
RTN4IP1Q8WWV3 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RTN4IP1Q8WWV3 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC16.31■□□□□ 0.2
RTN4IP1Q8WWV3 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC16.31■□□□□ 0.2
RTN4IP1Q8WWV3 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RTN4IP1Q8WWV3 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC16.31■□□□□ 0.2
RTN4IP1Q8WWV3 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RTN4IP1Q8WWV3 NXN-202ENST00000537628 1340 ntTSL 3 BASIC16.31■□□□□ 0.2
RTN4IP1Q8WWV3 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RTN4IP1Q8WWV3 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC16.31■□□□□ 0.2
RTN4IP1Q8WWV3 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC16.31■□□□□ 0.2
RTN4IP1Q8WWV3 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RTN4IP1Q8WWV3 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC16.31■□□□□ 0.2
RTN4IP1Q8WWV3 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
RTN4IP1Q8WWV3 C2orf69P4-201ENST00000565394 541 ntBASIC16.31■□□□□ 0.2
RTN4IP1Q8WWV3 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC16.31■□□□□ 0.2
RTN4IP1Q8WWV3 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RTN4IP1Q8WWV3 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RTN4IP1Q8WWV3 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
RTN4IP1Q8WWV3 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RTN4IP1Q8WWV3 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RTN4IP1Q8WWV3 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RTN4IP1Q8WWV3 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC16.31■□□□□ 0.2
RTN4IP1Q8WWV3 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC16.31■□□□□ 0.2
RTN4IP1Q8WWV3 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC16.31■□□□□ 0.2
RTN4IP1Q8WWV3 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RTN4IP1Q8WWV3 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RTN4IP1Q8WWV3 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RTN4IP1Q8WWV3 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RTN4IP1Q8WWV3 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RTN4IP1Q8WWV3 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
RTN4IP1Q8WWV3 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms