Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRAF3IP1Q8TDR0 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRAF3IP1Q8TDR0 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRAF3IP1Q8TDR0 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRAF3IP1Q8TDR0 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRAF3IP1Q8TDR0 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRAF3IP1Q8TDR0 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRAF3IP1Q8TDR0 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TRAF3IP1Q8TDR0 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRAF3IP1Q8TDR0 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
TRAF3IP1Q8TDR0 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
TRAF3IP1Q8TDR0 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC20.22■□□□□ 0.83
TRAF3IP1Q8TDR0 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC20.22■□□□□ 0.83
TRAF3IP1Q8TDR0 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRAF3IP1Q8TDR0 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRAF3IP1Q8TDR0 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRAF3IP1Q8TDR0 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRAF3IP1Q8TDR0 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TRAF3IP1Q8TDR0 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC20.22■□□□□ 0.83
TRAF3IP1Q8TDR0 PNN-205ENST00000556530 601 ntTSL 2 BASIC20.22■□□□□ 0.83
TRAF3IP1Q8TDR0 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC20.22■□□□□ 0.83
TRAF3IP1Q8TDR0 AC008687.6-201ENST00000596318 630 ntBASIC20.22■□□□□ 0.83
TRAF3IP1Q8TDR0 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TRAF3IP1Q8TDR0 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC20.22■□□□□ 0.83
TRAF3IP1Q8TDR0 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRAF3IP1Q8TDR0 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRAF3IP1Q8TDR0 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRAF3IP1Q8TDR0 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TRAF3IP1Q8TDR0 Z82202.1-201ENST00000623446 1880 ntBASIC20.22■□□□□ 0.83
TRAF3IP1Q8TDR0 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
TRAF3IP1Q8TDR0 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TRAF3IP1Q8TDR0 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRAF3IP1Q8TDR0 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRAF3IP1Q8TDR0 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
TRAF3IP1Q8TDR0 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRAF3IP1Q8TDR0 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC20.21■□□□□ 0.83
TRAF3IP1Q8TDR0 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRAF3IP1Q8TDR0 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRAF3IP1Q8TDR0 AC087289.5-201ENST00000586076 3175 ntBASIC20.21■□□□□ 0.83
TRAF3IP1Q8TDR0 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRAF3IP1Q8TDR0 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TRAF3IP1Q8TDR0 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRAF3IP1Q8TDR0 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TRAF3IP1Q8TDR0 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC20.21■□□□□ 0.83
TRAF3IP1Q8TDR0 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRAF3IP1Q8TDR0 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC20.21■□□□□ 0.83
TRAF3IP1Q8TDR0 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRAF3IP1Q8TDR0 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRAF3IP1Q8TDR0 AL032819.2-201ENST00000624543 2162 ntBASIC20.21■□□□□ 0.83
TRAF3IP1Q8TDR0 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
TRAF3IP1Q8TDR0 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TRAF3IP1Q8TDR0 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRAF3IP1Q8TDR0 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC20.21■□□□□ 0.83
TRAF3IP1Q8TDR0 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TRAF3IP1Q8TDR0 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRAF3IP1Q8TDR0 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
TRAF3IP1Q8TDR0 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
TRAF3IP1Q8TDR0 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
TRAF3IP1Q8TDR0 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TRAF3IP1Q8TDR0 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRAF3IP1Q8TDR0 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC20.2■□□□□ 0.82
TRAF3IP1Q8TDR0 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRAF3IP1Q8TDR0 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC20.2■□□□□ 0.82
TRAF3IP1Q8TDR0 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
TRAF3IP1Q8TDR0 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC20.2■□□□□ 0.82
TRAF3IP1Q8TDR0 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRAF3IP1Q8TDR0 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TRAF3IP1Q8TDR0 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TRAF3IP1Q8TDR0 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC20.2■□□□□ 0.82
TRAF3IP1Q8TDR0 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC20.2■□□□□ 0.82
TRAF3IP1Q8TDR0 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRAF3IP1Q8TDR0 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC20.2■□□□□ 0.82
TRAF3IP1Q8TDR0 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
TRAF3IP1Q8TDR0 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC20.2■□□□□ 0.82
TRAF3IP1Q8TDR0 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRAF3IP1Q8TDR0 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRAF3IP1Q8TDR0 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRAF3IP1Q8TDR0 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC20.2■□□□□ 0.82
TRAF3IP1Q8TDR0 AC090340.1-201ENST00000620778 4980 ntBASIC20.2■□□□□ 0.82
TRAF3IP1Q8TDR0 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC20.19■□□□□ 0.82
TRAF3IP1Q8TDR0 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
TRAF3IP1Q8TDR0 GOLGA6L3-201ENST00000507199 1679 ntBASIC20.19■□□□□ 0.82
TRAF3IP1Q8TDR0 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC20.19■□□□□ 0.82
TRAF3IP1Q8TDR0 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TRAF3IP1Q8TDR0 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
TRAF3IP1Q8TDR0 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
TRAF3IP1Q8TDR0 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.19■□□□□ 0.82
TRAF3IP1Q8TDR0 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
TRAF3IP1Q8TDR0 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRAF3IP1Q8TDR0 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRAF3IP1Q8TDR0 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRAF3IP1Q8TDR0 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRAF3IP1Q8TDR0 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRAF3IP1Q8TDR0 YBX1P10-201ENST00000444752 975 ntBASIC20.19■□□□□ 0.82
TRAF3IP1Q8TDR0 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC20.19■□□□□ 0.82
TRAF3IP1Q8TDR0 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TRAF3IP1Q8TDR0 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TRAF3IP1Q8TDR0 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TRAF3IP1Q8TDR0 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TRAF3IP1Q8TDR0 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms