Protein–RNA interactions for Protein: Q8N998

CCDC89, Coiled-coil domain-containing protein 89, humanhuman

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC89Q8N998 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC89Q8N998 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
CCDC89Q8N998 CRK-204ENST00000574295 1391 ntTSL 5 BASIC20.13■□□□□ 0.81
CCDC89Q8N998 MFF-205ENST00000354503 1085 ntTSL 2 BASIC20.13■□□□□ 0.81
CCDC89Q8N998 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC20.13■□□□□ 0.81
CCDC89Q8N998 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
CCDC89Q8N998 GLI3-203ENST00000437480 451 ntTSL 2 BASIC20.13■□□□□ 0.81
CCDC89Q8N998 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.13■□□□□ 0.81
CCDC89Q8N998 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.13■□□□□ 0.81
CCDC89Q8N998 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC20.13■□□□□ 0.81
CCDC89Q8N998 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
CCDC89Q8N998 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC89Q8N998 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC89Q8N998 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC89Q8N998 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC89Q8N998 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC20.12■□□□□ 0.81
CCDC89Q8N998 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC89Q8N998 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC89Q8N998 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
CCDC89Q8N998 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC89Q8N998 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC20.12■□□□□ 0.81
CCDC89Q8N998 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC20.12■□□□□ 0.81
CCDC89Q8N998 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC20.12■□□□□ 0.81
CCDC89Q8N998 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC89Q8N998 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC89Q8N998 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
CCDC89Q8N998 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
CCDC89Q8N998 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC89Q8N998 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC89Q8N998 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC89Q8N998 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
CCDC89Q8N998 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC20.12■□□□□ 0.81
CCDC89Q8N998 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC89Q8N998 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC20.11■□□□□ 0.81
CCDC89Q8N998 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC89Q8N998 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC89Q8N998 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC89Q8N998 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC89Q8N998 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC20.11■□□□□ 0.81
CCDC89Q8N998 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC89Q8N998 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC89Q8N998 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC89Q8N998 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC20.11■□□□□ 0.81
CCDC89Q8N998 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC89Q8N998 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC20.11■□□□□ 0.81
CCDC89Q8N998 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
CCDC89Q8N998 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC89Q8N998 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC20.11■□□□□ 0.81
CCDC89Q8N998 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC89Q8N998 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC20.11■□□□□ 0.81
CCDC89Q8N998 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC89Q8N998 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC89Q8N998 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC20.11■□□□□ 0.81
CCDC89Q8N998 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC89Q8N998 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC89Q8N998 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC89Q8N998 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC20.11■□□□□ 0.81
CCDC89Q8N998 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
CCDC89Q8N998 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC20.1■□□□□ 0.81
CCDC89Q8N998 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
CCDC89Q8N998 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC20.1■□□□□ 0.81
CCDC89Q8N998 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
CCDC89Q8N998 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC20.1■□□□□ 0.81
CCDC89Q8N998 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC89Q8N998 OR2A1-AS1-201ENST00000462305 773 ntBASIC20.1■□□□□ 0.81
CCDC89Q8N998 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20.1■□□□□ 0.81
CCDC89Q8N998 OAS3-207ENST00000551007 998 ntTSL 2 BASIC20.1■□□□□ 0.81
CCDC89Q8N998 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC20.1■□□□□ 0.81
CCDC89Q8N998 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.1■□□□□ 0.81
CCDC89Q8N998 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC89Q8N998 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC20.1■□□□□ 0.81
CCDC89Q8N998 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC89Q8N998 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC89Q8N998 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC89Q8N998 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC89Q8N998 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC89Q8N998 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC20.09■□□□□ 0.81
CCDC89Q8N998 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC20.09■□□□□ 0.81
CCDC89Q8N998 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC20.09■□□□□ 0.81
CCDC89Q8N998 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
CCDC89Q8N998 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC89Q8N998 GGT1-206ENST00000404223 952 ntTSL 2 BASIC20.09■□□□□ 0.81
CCDC89Q8N998 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC89Q8N998 NME6-213ENST00000451657 871 ntTSL 2 BASIC20.09■□□□□ 0.81
CCDC89Q8N998 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.09■□□□□ 0.81
CCDC89Q8N998 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.09■□□□□ 0.81
CCDC89Q8N998 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC20.09■□□□□ 0.81
CCDC89Q8N998 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC20.09■□□□□ 0.81
CCDC89Q8N998 AC005829.2-201ENST00000571422 1056 ntBASIC20.09■□□□□ 0.81
CCDC89Q8N998 VPS53-216ENST00000574029 585 ntTSL 4 BASIC20.09■□□□□ 0.81
CCDC89Q8N998 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC89Q8N998 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC89Q8N998 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC89Q8N998 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
CCDC89Q8N998 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
CCDC89Q8N998 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC20.09■□□□□ 0.81
CCDC89Q8N998 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC20.09■□□□□ 0.81
CCDC89Q8N998 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC89Q8N998 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC20.09■□□□□ 0.81
CCDC89Q8N998 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms