Protein–RNA interactions for Protein: Q8N668

COMMD1, COMM domain-containing protein 1, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1Q8N668 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
COMMD1Q8N668 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
COMMD1Q8N668 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
COMMD1Q8N668 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
COMMD1Q8N668 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
COMMD1Q8N668 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
COMMD1Q8N668 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
COMMD1Q8N668 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
COMMD1Q8N668 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
COMMD1Q8N668 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC16.09■□□□□ 0.17
COMMD1Q8N668 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
COMMD1Q8N668 TREX1-205ENST00000625293 1783 ntBASIC16.09■□□□□ 0.17
COMMD1Q8N668 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
COMMD1Q8N668 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
COMMD1Q8N668 VMO1-204ENST00000441199 741 ntTSL 2 BASIC16.09■□□□□ 0.17
COMMD1Q8N668 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC16.09■□□□□ 0.17
COMMD1Q8N668 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC16.09■□□□□ 0.17
COMMD1Q8N668 CYP2T3P-201ENST00000601990 817 ntBASIC16.09■□□□□ 0.17
COMMD1Q8N668 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
COMMD1Q8N668 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
COMMD1Q8N668 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
COMMD1Q8N668 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
COMMD1Q8N668 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
COMMD1Q8N668 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
COMMD1Q8N668 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC16.09■□□□□ 0.17
COMMD1Q8N668 AC020763.4-201ENST00000623414 4170 ntBASIC16.08■□□□□ 0.17
COMMD1Q8N668 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
COMMD1Q8N668 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
COMMD1Q8N668 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
COMMD1Q8N668 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
COMMD1Q8N668 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.08■□□□□ 0.17
COMMD1Q8N668 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC16.08■□□□□ 0.16
COMMD1Q8N668 AC011484.1-201ENST00000377652 1995 ntBASIC16.08■□□□□ 0.16
COMMD1Q8N668 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
COMMD1Q8N668 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
COMMD1Q8N668 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
COMMD1Q8N668 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC16.08■□□□□ 0.16
COMMD1Q8N668 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
COMMD1Q8N668 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
COMMD1Q8N668 CD99P1-205ENST00000527459 561 ntBASIC16.08■□□□□ 0.16
COMMD1Q8N668 KRT18P6-201ENST00000555540 1265 ntBASIC16.08■□□□□ 0.16
COMMD1Q8N668 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
COMMD1Q8N668 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
COMMD1Q8N668 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC16.08■□□□□ 0.16
COMMD1Q8N668 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC16.08■□□□□ 0.16
COMMD1Q8N668 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
COMMD1Q8N668 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
COMMD1Q8N668 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
COMMD1Q8N668 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
COMMD1Q8N668 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
COMMD1Q8N668 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC16.08■□□□□ 0.16
COMMD1Q8N668 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
COMMD1Q8N668 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
COMMD1Q8N668 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
COMMD1Q8N668 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
COMMD1Q8N668 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
COMMD1Q8N668 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
COMMD1Q8N668 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
COMMD1Q8N668 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
COMMD1Q8N668 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC16.07■□□□□ 0.16
COMMD1Q8N668 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
COMMD1Q8N668 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
COMMD1Q8N668 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
COMMD1Q8N668 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
COMMD1Q8N668 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
COMMD1Q8N668 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
COMMD1Q8N668 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC16.07■□□□□ 0.16
COMMD1Q8N668 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
COMMD1Q8N668 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
COMMD1Q8N668 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC16.07■□□□□ 0.16
COMMD1Q8N668 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
COMMD1Q8N668 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
COMMD1Q8N668 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC16.07■□□□□ 0.16
COMMD1Q8N668 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
COMMD1Q8N668 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
COMMD1Q8N668 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC16.07■□□□□ 0.16
COMMD1Q8N668 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC16.07■□□□□ 0.16
COMMD1Q8N668 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
COMMD1Q8N668 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
COMMD1Q8N668 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
COMMD1Q8N668 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
COMMD1Q8N668 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
COMMD1Q8N668 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
COMMD1Q8N668 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC16.07■□□□□ 0.16
COMMD1Q8N668 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC16.07■□□□□ 0.16
COMMD1Q8N668 AL390961.4-201ENST00000623958 2535 ntBASIC16.07■□□□□ 0.16
COMMD1Q8N668 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
COMMD1Q8N668 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
COMMD1Q8N668 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
COMMD1Q8N668 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
COMMD1Q8N668 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
COMMD1Q8N668 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC16.06■□□□□ 0.16
COMMD1Q8N668 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC16.06■□□□□ 0.16
COMMD1Q8N668 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
COMMD1Q8N668 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
COMMD1Q8N668 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
COMMD1Q8N668 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
COMMD1Q8N668 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
COMMD1Q8N668 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
COMMD1Q8N668 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms