Protein–RNA interactions for Protein: Q8IYA8

CCDC36, Interactor of HORMAD1 protein 1, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC36Q8IYA8 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC17.34■□□□□ 0.37
CCDC36Q8IYA8 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC36Q8IYA8 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC36Q8IYA8 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC36Q8IYA8 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC36Q8IYA8 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC36Q8IYA8 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC36Q8IYA8 KRT18P29-201ENST00000397031 1267 ntBASIC17.34■□□□□ 0.37
CCDC36Q8IYA8 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC17.34■□□□□ 0.37
CCDC36Q8IYA8 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC36Q8IYA8 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC36Q8IYA8 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.34■□□□□ 0.37
CCDC36Q8IYA8 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC17.34■□□□□ 0.37
CCDC36Q8IYA8 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC17.34■□□□□ 0.37
CCDC36Q8IYA8 KLF2-202ENST00000592003 564 ntTSL 3 BASIC17.34■□□□□ 0.37
CCDC36Q8IYA8 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC36Q8IYA8 PHGDH-210ENST00000641115 1638 ntBASIC17.34■□□□□ 0.37
CCDC36Q8IYA8 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC36Q8IYA8 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC36Q8IYA8 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCDC36Q8IYA8 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCDC36Q8IYA8 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCDC36Q8IYA8 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCDC36Q8IYA8 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCDC36Q8IYA8 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCDC36Q8IYA8 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCDC36Q8IYA8 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CCDC36Q8IYA8 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC17.33■□□□□ 0.37
CCDC36Q8IYA8 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCDC36Q8IYA8 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCDC36Q8IYA8 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC17.33■□□□□ 0.37
CCDC36Q8IYA8 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC17.33■□□□□ 0.37
CCDC36Q8IYA8 AP001271.2-201ENST00000624018 1556 ntBASIC17.33■□□□□ 0.37
CCDC36Q8IYA8 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC36Q8IYA8 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC36Q8IYA8 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC36Q8IYA8 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC36Q8IYA8 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
CCDC36Q8IYA8 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC36Q8IYA8 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC36Q8IYA8 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC36Q8IYA8 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC36Q8IYA8 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC17.33■□□□□ 0.36
CCDC36Q8IYA8 AC128676.1-201ENST00000454392 318 ntBASIC17.33■□□□□ 0.36
CCDC36Q8IYA8 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC36Q8IYA8 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC17.33■□□□□ 0.36
CCDC36Q8IYA8 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
CCDC36Q8IYA8 AC069544.1-201ENST00000609399 999 ntBASIC17.33■□□□□ 0.36
CCDC36Q8IYA8 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC36Q8IYA8 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC17.33■□□□□ 0.36
CCDC36Q8IYA8 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC36Q8IYA8 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC36Q8IYA8 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
CCDC36Q8IYA8 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC36Q8IYA8 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC17.33■□□□□ 0.36
CCDC36Q8IYA8 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC36Q8IYA8 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC36Q8IYA8 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC36Q8IYA8 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC36Q8IYA8 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC17.33■□□□□ 0.36
CCDC36Q8IYA8 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC36Q8IYA8 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC36Q8IYA8 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC36Q8IYA8 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC36Q8IYA8 AC116351.2-201ENST00000606540 1585 ntBASIC17.32■□□□□ 0.36
CCDC36Q8IYA8 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
CCDC36Q8IYA8 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC36Q8IYA8 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC36Q8IYA8 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC36Q8IYA8 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC36Q8IYA8 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC36Q8IYA8 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC36Q8IYA8 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC17.32■□□□□ 0.36
CCDC36Q8IYA8 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC17.32■□□□□ 0.36
CCDC36Q8IYA8 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC17.32■□□□□ 0.36
CCDC36Q8IYA8 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC17.32■□□□□ 0.36
CCDC36Q8IYA8 AC073648.6-201ENST00000641589 218 ntBASIC17.32■□□□□ 0.36
CCDC36Q8IYA8 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC36Q8IYA8 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CCDC36Q8IYA8 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC36Q8IYA8 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC36Q8IYA8 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
CCDC36Q8IYA8 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC36Q8IYA8 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC36Q8IYA8 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC36Q8IYA8 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CCDC36Q8IYA8 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC36Q8IYA8 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC17.31■□□□□ 0.36
CCDC36Q8IYA8 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.31■□□□□ 0.36
CCDC36Q8IYA8 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CCDC36Q8IYA8 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC36Q8IYA8 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC17.31■□□□□ 0.36
CCDC36Q8IYA8 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC17.31■□□□□ 0.36
CCDC36Q8IYA8 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CCDC36Q8IYA8 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC36Q8IYA8 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC36Q8IYA8 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC17.31■□□□□ 0.36
CCDC36Q8IYA8 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC17.31■□□□□ 0.36
CCDC36Q8IYA8 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC17.31■□□□□ 0.36
CCDC36Q8IYA8 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms