Protein–RNA interactions for Protein: Q86YW5

TREML1, Trem-like transcript 1 protein, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREML1Q86YW5 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.8■□□□□ 0.6
TREML1Q86YW5 AC004854.2-201ENST00000608450 1441 ntBASIC18.8■□□□□ 0.6
TREML1Q86YW5 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TREML1Q86YW5 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TREML1Q86YW5 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.8■□□□□ 0.6
TREML1Q86YW5 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.8■□□□□ 0.6
TREML1Q86YW5 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TREML1Q86YW5 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TREML1Q86YW5 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
TREML1Q86YW5 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TREML1Q86YW5 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.79■□□□□ 0.6
TREML1Q86YW5 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TREML1Q86YW5 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TREML1Q86YW5 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.79■□□□□ 0.6
TREML1Q86YW5 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
TREML1Q86YW5 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18.79■□□□□ 0.6
TREML1Q86YW5 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TREML1Q86YW5 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.79■□□□□ 0.6
TREML1Q86YW5 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.79■□□□□ 0.6
TREML1Q86YW5 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TREML1Q86YW5 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TREML1Q86YW5 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
TREML1Q86YW5 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TREML1Q86YW5 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
TREML1Q86YW5 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TREML1Q86YW5 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC18.79■□□□□ 0.6
TREML1Q86YW5 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC18.79■□□□□ 0.6
TREML1Q86YW5 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC18.79■□□□□ 0.6
TREML1Q86YW5 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
TREML1Q86YW5 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
TREML1Q86YW5 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TREML1Q86YW5 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TREML1Q86YW5 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.79■□□□□ 0.6
TREML1Q86YW5 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC18.79■□□□□ 0.6
TREML1Q86YW5 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.78■□□□□ 0.6
TREML1Q86YW5 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TREML1Q86YW5 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
TREML1Q86YW5 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
TREML1Q86YW5 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TREML1Q86YW5 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TREML1Q86YW5 AC067852.2-201ENST00000590513 2313 ntBASIC18.78■□□□□ 0.6
TREML1Q86YW5 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TREML1Q86YW5 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TREML1Q86YW5 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
TREML1Q86YW5 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TREML1Q86YW5 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC18.78■□□□□ 0.6
TREML1Q86YW5 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TREML1Q86YW5 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.78■□□□□ 0.6
TREML1Q86YW5 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
TREML1Q86YW5 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.78■□□□□ 0.6
TREML1Q86YW5 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TREML1Q86YW5 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
TREML1Q86YW5 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TREML1Q86YW5 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TREML1Q86YW5 AC020916.1-201ENST00000587762 1774 ntBASIC18.78■□□□□ 0.6
TREML1Q86YW5 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.78■□□□□ 0.6
TREML1Q86YW5 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.77■□□□□ 0.6
TREML1Q86YW5 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TREML1Q86YW5 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TREML1Q86YW5 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TREML1Q86YW5 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
TREML1Q86YW5 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
TREML1Q86YW5 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
TREML1Q86YW5 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TREML1Q86YW5 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TREML1Q86YW5 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TREML1Q86YW5 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
TREML1Q86YW5 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TREML1Q86YW5 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.77■□□□□ 0.6
TREML1Q86YW5 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.77■□□□□ 0.6
TREML1Q86YW5 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TREML1Q86YW5 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TREML1Q86YW5 COX20-201ENST00000366528 568 ntTSL 2 BASIC18.77■□□□□ 0.6
TREML1Q86YW5 UQCRFS1P1-201ENST00000435169 820 ntBASIC18.77■□□□□ 0.6
TREML1Q86YW5 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC18.77■□□□□ 0.6
TREML1Q86YW5 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC18.77■□□□□ 0.6
TREML1Q86YW5 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
TREML1Q86YW5 TERF1P2-201ENST00000583350 1212 ntBASIC18.77■□□□□ 0.6
TREML1Q86YW5 AC016405.3-201ENST00000607710 860 ntBASIC18.77■□□□□ 0.6
TREML1Q86YW5 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
TREML1Q86YW5 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
TREML1Q86YW5 GAS2L1P2-201ENST00000436355 1356 ntBASIC18.77■□□□□ 0.6
TREML1Q86YW5 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TREML1Q86YW5 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC18.77■□□□□ 0.6
TREML1Q86YW5 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
TREML1Q86YW5 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
TREML1Q86YW5 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
TREML1Q86YW5 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TREML1Q86YW5 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TREML1Q86YW5 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TREML1Q86YW5 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.76■□□□□ 0.59
TREML1Q86YW5 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TREML1Q86YW5 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TREML1Q86YW5 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TREML1Q86YW5 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
TREML1Q86YW5 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.76■□□□□ 0.59
TREML1Q86YW5 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TREML1Q86YW5 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TREML1Q86YW5 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
TREML1Q86YW5 STOX2-205ENST00000513034 807 ntTSL 3 BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms