Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
TRIM50Q86XT4 AC009237.14-201ENST00000609975 1594 ntBASIC21.68■■□□□ 1.06
TRIM50Q86XT4 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TRIM50Q86XT4 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TRIM50Q86XT4 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
TRIM50Q86XT4 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
TRIM50Q86XT4 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
TRIM50Q86XT4 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC21.67■■□□□ 1.06
TRIM50Q86XT4 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TRIM50Q86XT4 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC21.67■■□□□ 1.06
TRIM50Q86XT4 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TRIM50Q86XT4 TSPY14P-201ENST00000303979 915 ntBASIC21.67■■□□□ 1.06
TRIM50Q86XT4 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC21.67■■□□□ 1.06
TRIM50Q86XT4 KRT18P35-201ENST00000510488 1269 ntBASIC21.67■■□□□ 1.06
TRIM50Q86XT4 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
TRIM50Q86XT4 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC21.67■■□□□ 1.06
TRIM50Q86XT4 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
TRIM50Q86XT4 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC21.67■■□□□ 1.06
TRIM50Q86XT4 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.67■■□□□ 1.06
TRIM50Q86XT4 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC21.67■■□□□ 1.06
TRIM50Q86XT4 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
TRIM50Q86XT4 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TRIM50Q86XT4 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRIM50Q86XT4 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TRIM50Q86XT4 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC21.66■■□□□ 1.06
TRIM50Q86XT4 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC21.66■■□□□ 1.06
TRIM50Q86XT4 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
TRIM50Q86XT4 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC21.66■■□□□ 1.06
TRIM50Q86XT4 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRIM50Q86XT4 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC21.66■■□□□ 1.06
TRIM50Q86XT4 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
TRIM50Q86XT4 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TRIM50Q86XT4 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC21.66■■□□□ 1.06
TRIM50Q86XT4 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC21.66■■□□□ 1.06
TRIM50Q86XT4 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC21.66■■□□□ 1.06
TRIM50Q86XT4 EGLN1P1-201ENST00000531623 762 ntBASIC21.66■■□□□ 1.06
TRIM50Q86XT4 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC21.66■■□□□ 1.06
TRIM50Q86XT4 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC21.66■■□□□ 1.06
TRIM50Q86XT4 FAM87A-204ENST00000613235 858 ntBASIC21.66■■□□□ 1.06
TRIM50Q86XT4 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRIM50Q86XT4 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
TRIM50Q86XT4 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRIM50Q86XT4 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC21.66■■□□□ 1.06
TRIM50Q86XT4 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TRIM50Q86XT4 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
TRIM50Q86XT4 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TRIM50Q86XT4 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRIM50Q86XT4 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRIM50Q86XT4 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRIM50Q86XT4 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC21.65■■□□□ 1.06
TRIM50Q86XT4 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRIM50Q86XT4 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRIM50Q86XT4 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC21.65■■□□□ 1.06
TRIM50Q86XT4 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRIM50Q86XT4 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
TRIM50Q86XT4 AC096733.2-201ENST00000609937 1394 ntBASIC21.65■■□□□ 1.06
TRIM50Q86XT4 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC21.65■■□□□ 1.06
TRIM50Q86XT4 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
TRIM50Q86XT4 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRIM50Q86XT4 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
TRIM50Q86XT4 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC21.65■■□□□ 1.06
TRIM50Q86XT4 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC21.65■■□□□ 1.06
TRIM50Q86XT4 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRIM50Q86XT4 NME1-207ENST00000480143 964 ntTSL 2 BASIC21.65■■□□□ 1.06
TRIM50Q86XT4 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC21.65■■□□□ 1.06
TRIM50Q86XT4 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC21.65■■□□□ 1.06
TRIM50Q86XT4 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TRIM50Q86XT4 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC21.65■■□□□ 1.06
TRIM50Q86XT4 AL049597.2-201ENST00000565575 961 ntBASIC21.65■■□□□ 1.06
TRIM50Q86XT4 AL160286.2-201ENST00000567150 934 ntBASIC21.65■■□□□ 1.06
TRIM50Q86XT4 CYGB-204ENST00000589342 815 ntTSL 3 BASIC21.65■■□□□ 1.06
TRIM50Q86XT4 CLN6-221ENST00000637494 765 ntTSL 5 BASIC21.65■■□□□ 1.06
TRIM50Q86XT4 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRIM50Q86XT4 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC21.65■■□□□ 1.06
TRIM50Q86XT4 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TRIM50Q86XT4 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC21.65■■□□□ 1.06
TRIM50Q86XT4 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TRIM50Q86XT4 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TRIM50Q86XT4 USP39-204ENST00000409766 2033 ntTSL 2 BASIC21.65■■□□□ 1.06
TRIM50Q86XT4 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRIM50Q86XT4 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC21.65■■□□□ 1.06
TRIM50Q86XT4 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRIM50Q86XT4 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
TRIM50Q86XT4 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
TRIM50Q86XT4 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
TRIM50Q86XT4 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
TRIM50Q86XT4 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
TRIM50Q86XT4 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TRIM50Q86XT4 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC21.64■■□□□ 1.05
TRIM50Q86XT4 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC21.64■■□□□ 1.05
TRIM50Q86XT4 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
TRIM50Q86XT4 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC21.64■■□□□ 1.05
TRIM50Q86XT4 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC21.64■■□□□ 1.05
TRIM50Q86XT4 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TRIM50Q86XT4 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TRIM50Q86XT4 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
TRIM50Q86XT4 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TRIM50Q86XT4 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
TRIM50Q86XT4 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TRIM50Q86XT4 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms