Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RNF111Q6ZNA4 BET1L-207ENST00000529614 560 ntTSL 5 BASIC18.85■□□□□ 0.61
RNF111Q6ZNA4 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC18.85■□□□□ 0.61
RNF111Q6ZNA4 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNF111Q6ZNA4 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.85■□□□□ 0.61
RNF111Q6ZNA4 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
RNF111Q6ZNA4 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.85■□□□□ 0.61
RNF111Q6ZNA4 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNF111Q6ZNA4 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNF111Q6ZNA4 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNF111Q6ZNA4 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNF111Q6ZNA4 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RNF111Q6ZNA4 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RNF111Q6ZNA4 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNF111Q6ZNA4 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNF111Q6ZNA4 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.85■□□□□ 0.61
RNF111Q6ZNA4 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
RNF111Q6ZNA4 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNF111Q6ZNA4 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.84■□□□□ 0.61
RNF111Q6ZNA4 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNF111Q6ZNA4 AL390961.4-201ENST00000623958 2535 ntBASIC18.84■□□□□ 0.61
RNF111Q6ZNA4 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC18.84■□□□□ 0.61
RNF111Q6ZNA4 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RNF111Q6ZNA4 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC18.84■□□□□ 0.61
RNF111Q6ZNA4 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.84■□□□□ 0.61
RNF111Q6ZNA4 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNF111Q6ZNA4 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
RNF111Q6ZNA4 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.84■□□□□ 0.61
RNF111Q6ZNA4 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
RNF111Q6ZNA4 APTR-205ENST00000447009 902 ntTSL 2 BASIC18.84■□□□□ 0.61
RNF111Q6ZNA4 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
RNF111Q6ZNA4 C2orf69P4-201ENST00000565394 541 ntBASIC18.84■□□□□ 0.61
RNF111Q6ZNA4 BRWD1-AS2-201ENST00000603064 1028 ntBASIC18.84■□□□□ 0.61
RNF111Q6ZNA4 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RNF111Q6ZNA4 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNF111Q6ZNA4 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNF111Q6ZNA4 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.84■□□□□ 0.61
RNF111Q6ZNA4 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNF111Q6ZNA4 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
RNF111Q6ZNA4 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RNF111Q6ZNA4 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
RNF111Q6ZNA4 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNF111Q6ZNA4 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RNF111Q6ZNA4 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
RNF111Q6ZNA4 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.84■□□□□ 0.61
RNF111Q6ZNA4 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RNF111Q6ZNA4 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RNF111Q6ZNA4 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RNF111Q6ZNA4 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.83■□□□□ 0.61
RNF111Q6ZNA4 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.83■□□□□ 0.61
RNF111Q6ZNA4 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RNF111Q6ZNA4 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.83■□□□□ 0.6
RNF111Q6ZNA4 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RNF111Q6ZNA4 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RNF111Q6ZNA4 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RNF111Q6ZNA4 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC18.83■□□□□ 0.6
RNF111Q6ZNA4 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RNF111Q6ZNA4 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
RNF111Q6ZNA4 AC135050.7-201ENST00000624508 2218 ntBASIC18.83■□□□□ 0.6
RNF111Q6ZNA4 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.83■□□□□ 0.6
RNF111Q6ZNA4 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.83■□□□□ 0.6
RNF111Q6ZNA4 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
RNF111Q6ZNA4 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.83■□□□□ 0.6
RNF111Q6ZNA4 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.83■□□□□ 0.6
RNF111Q6ZNA4 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RNF111Q6ZNA4 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.83■□□□□ 0.6
RNF111Q6ZNA4 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF111Q6ZNA4 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RNF111Q6ZNA4 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC18.82■□□□□ 0.6
RNF111Q6ZNA4 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RNF111Q6ZNA4 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
RNF111Q6ZNA4 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF111Q6ZNA4 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
RNF111Q6ZNA4 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF111Q6ZNA4 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RNF111Q6ZNA4 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC18.82■□□□□ 0.6
RNF111Q6ZNA4 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
RNF111Q6ZNA4 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RNF111Q6ZNA4 NME6-213ENST00000451657 871 ntTSL 2 BASIC18.82■□□□□ 0.6
RNF111Q6ZNA4 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC18.82■□□□□ 0.6
RNF111Q6ZNA4 MYC-209ENST00000641252 345 ntBASIC18.82■□□□□ 0.6
RNF111Q6ZNA4 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF111Q6ZNA4 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF111Q6ZNA4 AP000997.3-201ENST00000623333 2250 ntBASIC18.82■□□□□ 0.6
RNF111Q6ZNA4 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RNF111Q6ZNA4 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF111Q6ZNA4 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC18.82■□□□□ 0.6
RNF111Q6ZNA4 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
RNF111Q6ZNA4 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF111Q6ZNA4 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
RNF111Q6ZNA4 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF111Q6ZNA4 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF111Q6ZNA4 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RNF111Q6ZNA4 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF111Q6ZNA4 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
RNF111Q6ZNA4 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RNF111Q6ZNA4 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF111Q6ZNA4 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC18.81■□□□□ 0.6
RNF111Q6ZNA4 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
RNF111Q6ZNA4 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms