Protein–RNA interactions for Protein: Q6PJG9

LRFN4, Leucine-rich repeat and fibronectin type-III domain-containing protein 4, humanhuman

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4Q6PJG9 TFP1-202ENST00000475455 1573 ntBASIC17.46■□□□□ 0.39
LRFN4Q6PJG9 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LRFN4Q6PJG9 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LRFN4Q6PJG9 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
LRFN4Q6PJG9 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
LRFN4Q6PJG9 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LRFN4Q6PJG9 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LRFN4Q6PJG9 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC17.46■□□□□ 0.39
LRFN4Q6PJG9 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC17.46■□□□□ 0.39
LRFN4Q6PJG9 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
LRFN4Q6PJG9 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC17.46■□□□□ 0.39
LRFN4Q6PJG9 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LRFN4Q6PJG9 SOX15-203ENST00000570788 1093 ntBASIC17.46■□□□□ 0.39
LRFN4Q6PJG9 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC17.46■□□□□ 0.39
LRFN4Q6PJG9 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC17.46■□□□□ 0.39
LRFN4Q6PJG9 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
LRFN4Q6PJG9 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
LRFN4Q6PJG9 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC17.46■□□□□ 0.39
LRFN4Q6PJG9 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
LRFN4Q6PJG9 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LRFN4Q6PJG9 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
LRFN4Q6PJG9 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.46■□□□□ 0.38
LRFN4Q6PJG9 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC17.46■□□□□ 0.38
LRFN4Q6PJG9 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.38
LRFN4Q6PJG9 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
LRFN4Q6PJG9 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC17.45■□□□□ 0.38
LRFN4Q6PJG9 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LRFN4Q6PJG9 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LRFN4Q6PJG9 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC17.45■□□□□ 0.38
LRFN4Q6PJG9 AC020763.4-201ENST00000623414 4170 ntBASIC17.45■□□□□ 0.38
LRFN4Q6PJG9 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
LRFN4Q6PJG9 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
LRFN4Q6PJG9 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LRFN4Q6PJG9 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.45■□□□□ 0.38
LRFN4Q6PJG9 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LRFN4Q6PJG9 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LRFN4Q6PJG9 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LRFN4Q6PJG9 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LRFN4Q6PJG9 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
LRFN4Q6PJG9 UNC93B4-201ENST00000505679 747 ntBASIC17.45■□□□□ 0.38
LRFN4Q6PJG9 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC17.45■□□□□ 0.38
LRFN4Q6PJG9 UNC93B5-201ENST00000530315 699 ntBASIC17.45■□□□□ 0.38
LRFN4Q6PJG9 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC17.45■□□□□ 0.38
LRFN4Q6PJG9 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LRFN4Q6PJG9 KLF2-202ENST00000592003 564 ntTSL 3 BASIC17.45■□□□□ 0.38
LRFN4Q6PJG9 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC17.45■□□□□ 0.38
LRFN4Q6PJG9 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC17.45■□□□□ 0.38
LRFN4Q6PJG9 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC17.45■□□□□ 0.38
LRFN4Q6PJG9 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
LRFN4Q6PJG9 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
LRFN4Q6PJG9 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LRFN4Q6PJG9 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC17.45■□□□□ 0.38
LRFN4Q6PJG9 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LRFN4Q6PJG9 TREX1-205ENST00000625293 1783 ntBASIC17.45■□□□□ 0.38
LRFN4Q6PJG9 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LRFN4Q6PJG9 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LRFN4Q6PJG9 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC17.45■□□□□ 0.38
LRFN4Q6PJG9 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LRFN4Q6PJG9 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
LRFN4Q6PJG9 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
LRFN4Q6PJG9 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC17.45■□□□□ 0.38
LRFN4Q6PJG9 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
LRFN4Q6PJG9 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
LRFN4Q6PJG9 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
LRFN4Q6PJG9 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC17.44■□□□□ 0.38
LRFN4Q6PJG9 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LRFN4Q6PJG9 ABHD17AP6-201ENST00000458502 1044 ntBASIC17.44■□□□□ 0.38
LRFN4Q6PJG9 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
LRFN4Q6PJG9 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC17.44■□□□□ 0.38
LRFN4Q6PJG9 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC17.44■□□□□ 0.38
LRFN4Q6PJG9 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
LRFN4Q6PJG9 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LRFN4Q6PJG9 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
LRFN4Q6PJG9 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
LRFN4Q6PJG9 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LRFN4Q6PJG9 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC17.44■□□□□ 0.38
LRFN4Q6PJG9 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LRFN4Q6PJG9 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LRFN4Q6PJG9 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
LRFN4Q6PJG9 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
LRFN4Q6PJG9 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LRFN4Q6PJG9 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC17.43■□□□□ 0.38
LRFN4Q6PJG9 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.43■□□□□ 0.38
LRFN4Q6PJG9 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
LRFN4Q6PJG9 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LRFN4Q6PJG9 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.43■□□□□ 0.38
LRFN4Q6PJG9 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
LRFN4Q6PJG9 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC17.43■□□□□ 0.38
LRFN4Q6PJG9 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LRFN4Q6PJG9 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LRFN4Q6PJG9 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LRFN4Q6PJG9 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC17.43■□□□□ 0.38
LRFN4Q6PJG9 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC17.43■□□□□ 0.38
LRFN4Q6PJG9 RNA5SP413-201ENST00000516373 109 ntBASIC17.43■□□□□ 0.38
LRFN4Q6PJG9 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC17.43■□□□□ 0.38
LRFN4Q6PJG9 AC008687.6-201ENST00000596318 630 ntBASIC17.43■□□□□ 0.38
LRFN4Q6PJG9 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC17.43■□□□□ 0.38
LRFN4Q6PJG9 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LRFN4Q6PJG9 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LRFN4Q6PJG9 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms