Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
FOXR1Q6PIV2 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
FOXR1Q6PIV2 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
FOXR1Q6PIV2 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
FOXR1Q6PIV2 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.17■□□□□ 0.82
FOXR1Q6PIV2 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
FOXR1Q6PIV2 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
FOXR1Q6PIV2 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
FOXR1Q6PIV2 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
FOXR1Q6PIV2 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
FOXR1Q6PIV2 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC20.17■□□□□ 0.82
FOXR1Q6PIV2 AL512625.2-201ENST00000417533 625 ntBASIC20.17■□□□□ 0.82
FOXR1Q6PIV2 DUSP5P2-201ENST00000426873 1033 ntBASIC20.17■□□□□ 0.82
FOXR1Q6PIV2 AL158047.1-201ENST00000445918 881 ntBASIC20.17■□□□□ 0.82
FOXR1Q6PIV2 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.17■□□□□ 0.82
FOXR1Q6PIV2 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.17■□□□□ 0.82
FOXR1Q6PIV2 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.17■□□□□ 0.82
FOXR1Q6PIV2 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC20.17■□□□□ 0.82
FOXR1Q6PIV2 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
FOXR1Q6PIV2 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.17■□□□□ 0.82
FOXR1Q6PIV2 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
FOXR1Q6PIV2 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
FOXR1Q6PIV2 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
FOXR1Q6PIV2 NOC2LP2-201ENST00000407594 1944 ntBASIC20.17■□□□□ 0.82
FOXR1Q6PIV2 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
FOXR1Q6PIV2 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
FOXR1Q6PIV2 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC20.17■□□□□ 0.82
FOXR1Q6PIV2 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
FOXR1Q6PIV2 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC20.16■□□□□ 0.82
FOXR1Q6PIV2 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
FOXR1Q6PIV2 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.16■□□□□ 0.82
FOXR1Q6PIV2 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
FOXR1Q6PIV2 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
FOXR1Q6PIV2 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
FOXR1Q6PIV2 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
FOXR1Q6PIV2 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC20.16■□□□□ 0.82
FOXR1Q6PIV2 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.16■□□□□ 0.82
FOXR1Q6PIV2 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC20.16■□□□□ 0.82
FOXR1Q6PIV2 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
FOXR1Q6PIV2 AC083880.1-201ENST00000608266 535 ntBASIC20.16■□□□□ 0.82
FOXR1Q6PIV2 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.16■□□□□ 0.82
FOXR1Q6PIV2 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.16■□□□□ 0.82
FOXR1Q6PIV2 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.16■□□□□ 0.82
FOXR1Q6PIV2 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.16■□□□□ 0.82
FOXR1Q6PIV2 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
FOXR1Q6PIV2 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
FOXR1Q6PIV2 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
FOXR1Q6PIV2 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
FOXR1Q6PIV2 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC20.16■□□□□ 0.82
FOXR1Q6PIV2 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC20.16■□□□□ 0.82
FOXR1Q6PIV2 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC20.16■□□□□ 0.82
FOXR1Q6PIV2 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
FOXR1Q6PIV2 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC20.15■□□□□ 0.82
FOXR1Q6PIV2 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC20.15■□□□□ 0.82
FOXR1Q6PIV2 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC20.15■□□□□ 0.82
FOXR1Q6PIV2 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
FOXR1Q6PIV2 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC20.15■□□□□ 0.82
FOXR1Q6PIV2 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC20.15■□□□□ 0.82
FOXR1Q6PIV2 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
FOXR1Q6PIV2 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
FOXR1Q6PIV2 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
FOXR1Q6PIV2 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC20.15■□□□□ 0.82
FOXR1Q6PIV2 AC006058.3-201ENST00000606217 1069 ntBASIC20.15■□□□□ 0.82
FOXR1Q6PIV2 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
FOXR1Q6PIV2 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
FOXR1Q6PIV2 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
FOXR1Q6PIV2 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
FOXR1Q6PIV2 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
FOXR1Q6PIV2 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
FOXR1Q6PIV2 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
FOXR1Q6PIV2 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
FOXR1Q6PIV2 USP49-202ENST00000373010 2446 ntTSL 5 BASIC20.15■□□□□ 0.82
FOXR1Q6PIV2 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
FOXR1Q6PIV2 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
FOXR1Q6PIV2 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
FOXR1Q6PIV2 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
FOXR1Q6PIV2 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
FOXR1Q6PIV2 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
FOXR1Q6PIV2 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.82
FOXR1Q6PIV2 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.82
FOXR1Q6PIV2 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.82
FOXR1Q6PIV2 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC20.14■□□□□ 0.81
FOXR1Q6PIV2 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC20.14■□□□□ 0.81
FOXR1Q6PIV2 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
FOXR1Q6PIV2 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
FOXR1Q6PIV2 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
FOXR1Q6PIV2 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
FOXR1Q6PIV2 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
FOXR1Q6PIV2 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
FOXR1Q6PIV2 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
FOXR1Q6PIV2 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
FOXR1Q6PIV2 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.14■□□□□ 0.81
FOXR1Q6PIV2 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC20.14■□□□□ 0.81
FOXR1Q6PIV2 AP006294.2-201ENST00000641667 209 ntBASIC20.14■□□□□ 0.81
FOXR1Q6PIV2 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
FOXR1Q6PIV2 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
FOXR1Q6PIV2 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.81
FOXR1Q6PIV2 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
FOXR1Q6PIV2 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
FOXR1Q6PIV2 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms