Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 BX276092.2-201ENST00000417668 665 ntBASIC17.74■□□□□ 0.43
TMEM53Q6P2H8 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC17.74■□□□□ 0.43
TMEM53Q6P2H8 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC17.74■□□□□ 0.43
TMEM53Q6P2H8 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TMEM53Q6P2H8 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC17.74■□□□□ 0.43
TMEM53Q6P2H8 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.74■□□□□ 0.43
TMEM53Q6P2H8 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.74■□□□□ 0.43
TMEM53Q6P2H8 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TMEM53Q6P2H8 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
TMEM53Q6P2H8 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
TMEM53Q6P2H8 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TMEM53Q6P2H8 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.74■□□□□ 0.43
TMEM53Q6P2H8 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
TMEM53Q6P2H8 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TMEM53Q6P2H8 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
TMEM53Q6P2H8 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.73■□□□□ 0.43
TMEM53Q6P2H8 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
TMEM53Q6P2H8 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.73■□□□□ 0.43
TMEM53Q6P2H8 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TMEM53Q6P2H8 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.73■□□□□ 0.43
TMEM53Q6P2H8 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TMEM53Q6P2H8 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TMEM53Q6P2H8 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
TMEM53Q6P2H8 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TMEM53Q6P2H8 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.73■□□□□ 0.43
TMEM53Q6P2H8 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
TMEM53Q6P2H8 SERPINH1P1-201ENST00000419794 1249 ntBASIC17.73■□□□□ 0.43
TMEM53Q6P2H8 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC17.73■□□□□ 0.43
TMEM53Q6P2H8 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
TMEM53Q6P2H8 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
TMEM53Q6P2H8 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC17.73■□□□□ 0.43
TMEM53Q6P2H8 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC17.73■□□□□ 0.43
TMEM53Q6P2H8 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC17.73■□□□□ 0.43
TMEM53Q6P2H8 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TMEM53Q6P2H8 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
TMEM53Q6P2H8 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TMEM53Q6P2H8 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TMEM53Q6P2H8 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
TMEM53Q6P2H8 PRORSD1P-202ENST00000563365 2154 ntBASIC17.73■□□□□ 0.43
TMEM53Q6P2H8 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TMEM53Q6P2H8 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TMEM53Q6P2H8 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC17.73■□□□□ 0.43
TMEM53Q6P2H8 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TMEM53Q6P2H8 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TMEM53Q6P2H8 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TMEM53Q6P2H8 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC17.72■□□□□ 0.43
TMEM53Q6P2H8 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
TMEM53Q6P2H8 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC17.72■□□□□ 0.43
TMEM53Q6P2H8 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC17.72■□□□□ 0.43
TMEM53Q6P2H8 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TMEM53Q6P2H8 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
TMEM53Q6P2H8 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TMEM53Q6P2H8 MAP2K4P1-201ENST00000438453 1195 ntBASIC17.72■□□□□ 0.43
TMEM53Q6P2H8 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC17.72■□□□□ 0.43
TMEM53Q6P2H8 AL109923.1-201ENST00000618799 583 ntBASIC17.72■□□□□ 0.43
TMEM53Q6P2H8 PFKL-212ENST00000628044 129 ntTSL 3 BASIC17.72■□□□□ 0.43
TMEM53Q6P2H8 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
TMEM53Q6P2H8 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC17.72■□□□□ 0.43
TMEM53Q6P2H8 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TMEM53Q6P2H8 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TMEM53Q6P2H8 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TMEM53Q6P2H8 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TMEM53Q6P2H8 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TMEM53Q6P2H8 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
TMEM53Q6P2H8 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
TMEM53Q6P2H8 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TMEM53Q6P2H8 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TMEM53Q6P2H8 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
TMEM53Q6P2H8 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TMEM53Q6P2H8 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TMEM53Q6P2H8 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.71■□□□□ 0.43
TMEM53Q6P2H8 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TMEM53Q6P2H8 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
TMEM53Q6P2H8 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
TMEM53Q6P2H8 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TMEM53Q6P2H8 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TMEM53Q6P2H8 AC079598.2-202ENST00000546624 1451 ntBASIC17.71■□□□□ 0.43
TMEM53Q6P2H8 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TMEM53Q6P2H8 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
TMEM53Q6P2H8 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC17.71■□□□□ 0.43
TMEM53Q6P2H8 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TMEM53Q6P2H8 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TMEM53Q6P2H8 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TMEM53Q6P2H8 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TMEM53Q6P2H8 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TMEM53Q6P2H8 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TMEM53Q6P2H8 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC17.71■□□□□ 0.43
TMEM53Q6P2H8 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC17.71■□□□□ 0.43
TMEM53Q6P2H8 TSPY6P-201ENST00000448518 926 ntBASIC17.71■□□□□ 0.43
TMEM53Q6P2H8 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC17.71■□□□□ 0.43
TMEM53Q6P2H8 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC17.71■□□□□ 0.43
TMEM53Q6P2H8 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC17.71■□□□□ 0.43
TMEM53Q6P2H8 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TMEM53Q6P2H8 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC17.71■□□□□ 0.43
TMEM53Q6P2H8 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC17.71■□□□□ 0.43
TMEM53Q6P2H8 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TMEM53Q6P2H8 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC17.71■□□□□ 0.43
TMEM53Q6P2H8 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TMEM53Q6P2H8 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TMEM53Q6P2H8 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms