Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LPCAT4Q643R3 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LPCAT4Q643R3 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LPCAT4Q643R3 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC18.29■□□□□ 0.52
LPCAT4Q643R3 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LPCAT4Q643R3 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LPCAT4Q643R3 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC18.29■□□□□ 0.52
LPCAT4Q643R3 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
LPCAT4Q643R3 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC18.29■□□□□ 0.52
LPCAT4Q643R3 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LPCAT4Q643R3 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC18.29■□□□□ 0.52
LPCAT4Q643R3 AICDA-202ENST00000537228 667 ntTSL 5 BASIC18.29■□□□□ 0.52
LPCAT4Q643R3 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LPCAT4Q643R3 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC18.29■□□□□ 0.52
LPCAT4Q643R3 MIR4466-201ENST00000606121 54 ntBASIC18.29■□□□□ 0.52
LPCAT4Q643R3 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC18.29■□□□□ 0.52
LPCAT4Q643R3 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LPCAT4Q643R3 PTBP1P-201ENST00000554374 1601 ntBASIC18.29■□□□□ 0.52
LPCAT4Q643R3 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LPCAT4Q643R3 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
LPCAT4Q643R3 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LPCAT4Q643R3 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LPCAT4Q643R3 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.29■□□□□ 0.52
LPCAT4Q643R3 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
LPCAT4Q643R3 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
LPCAT4Q643R3 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.29■□□□□ 0.52
LPCAT4Q643R3 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LPCAT4Q643R3 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LPCAT4Q643R3 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.28■□□□□ 0.52
LPCAT4Q643R3 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
LPCAT4Q643R3 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LPCAT4Q643R3 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LPCAT4Q643R3 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.28■□□□□ 0.52
LPCAT4Q643R3 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LPCAT4Q643R3 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
LPCAT4Q643R3 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
LPCAT4Q643R3 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LPCAT4Q643R3 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
LPCAT4Q643R3 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC18.28■□□□□ 0.52
LPCAT4Q643R3 AC091799.1-201ENST00000422823 811 ntBASIC18.28■□□□□ 0.52
LPCAT4Q643R3 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LPCAT4Q643R3 RPP21-222ENST00000433076 577 ntTSL 2 BASIC18.28■□□□□ 0.52
LPCAT4Q643R3 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC18.28■□□□□ 0.52
LPCAT4Q643R3 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LPCAT4Q643R3 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LPCAT4Q643R3 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
LPCAT4Q643R3 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
LPCAT4Q643R3 KRT8P17-201ENST00000453110 1448 ntBASIC18.28■□□□□ 0.52
LPCAT4Q643R3 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LPCAT4Q643R3 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
LPCAT4Q643R3 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LPCAT4Q643R3 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LPCAT4Q643R3 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
LPCAT4Q643R3 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LPCAT4Q643R3 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LPCAT4Q643R3 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
LPCAT4Q643R3 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
LPCAT4Q643R3 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.28■□□□□ 0.52
LPCAT4Q643R3 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LPCAT4Q643R3 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LPCAT4Q643R3 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LPCAT4Q643R3 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
LPCAT4Q643R3 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LPCAT4Q643R3 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
LPCAT4Q643R3 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC18.27■□□□□ 0.52
LPCAT4Q643R3 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC18.27■□□□□ 0.52
LPCAT4Q643R3 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
LPCAT4Q643R3 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LPCAT4Q643R3 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
LPCAT4Q643R3 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
LPCAT4Q643R3 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LPCAT4Q643R3 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
LPCAT4Q643R3 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.27■□□□□ 0.52
LPCAT4Q643R3 KRT16P6-202ENST00000425692 1426 ntBASIC18.27■□□□□ 0.52
LPCAT4Q643R3 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
LPCAT4Q643R3 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18.27■□□□□ 0.52
LPCAT4Q643R3 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC18.27■□□□□ 0.52
LPCAT4Q643R3 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
LPCAT4Q643R3 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
LPCAT4Q643R3 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LPCAT4Q643R3 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC18.27■□□□□ 0.52
LPCAT4Q643R3 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
LPCAT4Q643R3 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LPCAT4Q643R3 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
LPCAT4Q643R3 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.51
LPCAT4Q643R3 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.27■□□□□ 0.51
LPCAT4Q643R3 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
LPCAT4Q643R3 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
LPCAT4Q643R3 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.27■□□□□ 0.51
LPCAT4Q643R3 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.27■□□□□ 0.51
LPCAT4Q643R3 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
LPCAT4Q643R3 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC18.26■□□□□ 0.51
LPCAT4Q643R3 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LPCAT4Q643R3 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LPCAT4Q643R3 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
LPCAT4Q643R3 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
LPCAT4Q643R3 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.26■□□□□ 0.51
LPCAT4Q643R3 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LPCAT4Q643R3 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LPCAT4Q643R3 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms