Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC13.28□□□□□ -0.28
LINC00242Q5T6M2 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LINC00242Q5T6M2 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
LINC00242Q5T6M2 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LINC00242Q5T6M2 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LINC00242Q5T6M2 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LINC00242Q5T6M2 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
LINC00242Q5T6M2 AR-207ENST00000612010 3896 ntTSL 5 BASIC13.28□□□□□ -0.28
LINC00242Q5T6M2 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
LINC00242Q5T6M2 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC13.28□□□□□ -0.28
LINC00242Q5T6M2 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
LINC00242Q5T6M2 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC13.28□□□□□ -0.28
LINC00242Q5T6M2 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LINC00242Q5T6M2 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LINC00242Q5T6M2 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC13.28□□□□□ -0.28
LINC00242Q5T6M2 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LINC00242Q5T6M2 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC13.28□□□□□ -0.28
LINC00242Q5T6M2 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC13.28□□□□□ -0.28
LINC00242Q5T6M2 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LINC00242Q5T6M2 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
LINC00242Q5T6M2 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
LINC00242Q5T6M2 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC13.28□□□□□ -0.28
LINC00242Q5T6M2 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC13.28□□□□□ -0.28
LINC00242Q5T6M2 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LINC00242Q5T6M2 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC13.28□□□□□ -0.28
LINC00242Q5T6M2 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
LINC00242Q5T6M2 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
LINC00242Q5T6M2 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC13.28□□□□□ -0.28
LINC00242Q5T6M2 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LINC00242Q5T6M2 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LINC00242Q5T6M2 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC13.28□□□□□ -0.28
LINC00242Q5T6M2 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC13.28□□□□□ -0.28
LINC00242Q5T6M2 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
LINC00242Q5T6M2 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
LINC00242Q5T6M2 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
LINC00242Q5T6M2 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
LINC00242Q5T6M2 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
LINC00242Q5T6M2 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
LINC00242Q5T6M2 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
LINC00242Q5T6M2 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.28
LINC00242Q5T6M2 HCG11-201ENST00000411553 5696 ntBASIC13.27□□□□□ -0.28
LINC00242Q5T6M2 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC13.27□□□□□ -0.28
LINC00242Q5T6M2 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC13.27□□□□□ -0.28
LINC00242Q5T6M2 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
LINC00242Q5T6M2 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
LINC00242Q5T6M2 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LINC00242Q5T6M2 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
LINC00242Q5T6M2 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC13.27□□□□□ -0.29
LINC00242Q5T6M2 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
LINC00242Q5T6M2 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
LINC00242Q5T6M2 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
LINC00242Q5T6M2 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
LINC00242Q5T6M2 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
LINC00242Q5T6M2 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC13.27□□□□□ -0.29
LINC00242Q5T6M2 AC018553.1-201ENST00000616682 1458 ntBASIC13.27□□□□□ -0.29
LINC00242Q5T6M2 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LINC00242Q5T6M2 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LINC00242Q5T6M2 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
LINC00242Q5T6M2 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LINC00242Q5T6M2 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
LINC00242Q5T6M2 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LINC00242Q5T6M2 AC135050.7-201ENST00000624508 2218 ntBASIC13.27□□□□□ -0.29
LINC00242Q5T6M2 COMP-202ENST00000425807 2292 ntTSL 2 BASIC13.27□□□□□ -0.29
LINC00242Q5T6M2 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LINC00242Q5T6M2 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
LINC00242Q5T6M2 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LINC00242Q5T6M2 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
LINC00242Q5T6M2 AC090340.1-201ENST00000620778 4980 ntBASIC13.27□□□□□ -0.29
LINC00242Q5T6M2 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LINC00242Q5T6M2 AL390961.4-201ENST00000623958 2535 ntBASIC13.27□□□□□ -0.29
LINC00242Q5T6M2 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LINC00242Q5T6M2 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LINC00242Q5T6M2 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LINC00242Q5T6M2 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LINC00242Q5T6M2 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
LINC00242Q5T6M2 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LINC00242Q5T6M2 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
LINC00242Q5T6M2 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
LINC00242Q5T6M2 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
LINC00242Q5T6M2 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LINC00242Q5T6M2 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
LINC00242Q5T6M2 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LINC00242Q5T6M2 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC13.26□□□□□ -0.29
LINC00242Q5T6M2 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LINC00242Q5T6M2 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC13.26□□□□□ -0.29
LINC00242Q5T6M2 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
LINC00242Q5T6M2 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC13.26□□□□□ -0.29
LINC00242Q5T6M2 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
LINC00242Q5T6M2 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LINC00242Q5T6M2 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
LINC00242Q5T6M2 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC13.26□□□□□ -0.29
LINC00242Q5T6M2 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
LINC00242Q5T6M2 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
LINC00242Q5T6M2 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
LINC00242Q5T6M2 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
LINC00242Q5T6M2 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
LINC00242Q5T6M2 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
LINC00242Q5T6M2 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC13.26□□□□□ -0.29
LINC00242Q5T6M2 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
LINC00242Q5T6M2 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms