Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
CBX1P83916 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CBX1P83916 AC068418.2-201ENST00000577309 3703 ntBASIC20.35■□□□□ 0.85
CBX1P83916 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CBX1P83916 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.35■□□□□ 0.85
CBX1P83916 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
CBX1P83916 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
CBX1P83916 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CBX1P83916 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CBX1P83916 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC20.35■□□□□ 0.85
CBX1P83916 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CBX1P83916 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC20.35■□□□□ 0.85
CBX1P83916 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC20.35■□□□□ 0.85
CBX1P83916 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
CBX1P83916 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC20.34■□□□□ 0.85
CBX1P83916 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
CBX1P83916 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CBX1P83916 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CBX1P83916 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
CBX1P83916 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CBX1P83916 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CBX1P83916 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC20.34■□□□□ 0.85
CBX1P83916 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC20.34■□□□□ 0.85
CBX1P83916 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.34■□□□□ 0.85
CBX1P83916 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CBX1P83916 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CBX1P83916 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC20.34■□□□□ 0.85
CBX1P83916 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CBX1P83916 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CBX1P83916 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC20.34■□□□□ 0.85
CBX1P83916 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
CBX1P83916 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CBX1P83916 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CBX1P83916 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CBX1P83916 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CBX1P83916 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CBX1P83916 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CBX1P83916 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CBX1P83916 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CBX1P83916 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CBX1P83916 AD000864.1-201ENST00000624076 2295 ntBASIC20.33■□□□□ 0.85
CBX1P83916 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CBX1P83916 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.33■□□□□ 0.85
CBX1P83916 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
CBX1P83916 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CBX1P83916 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CBX1P83916 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CBX1P83916 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CBX1P83916 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
CBX1P83916 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CBX1P83916 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CBX1P83916 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
CBX1P83916 AC139795.1-202ENST00000500444 432 ntBASIC20.33■□□□□ 0.85
CBX1P83916 AC009102.2-201ENST00000606772 1639 ntBASIC20.33■□□□□ 0.84
CBX1P83916 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CBX1P83916 AC012317.2-201ENST00000623305 2251 ntBASIC20.33■□□□□ 0.84
CBX1P83916 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CBX1P83916 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CBX1P83916 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CBX1P83916 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CBX1P83916 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CBX1P83916 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC20.32■□□□□ 0.84
CBX1P83916 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CBX1P83916 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC20.32■□□□□ 0.84
CBX1P83916 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CBX1P83916 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC20.32■□□□□ 0.84
CBX1P83916 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CBX1P83916 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC20.32■□□□□ 0.84
CBX1P83916 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.32■□□□□ 0.84
CBX1P83916 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
CBX1P83916 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CBX1P83916 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC20.32■□□□□ 0.84
CBX1P83916 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC20.32■□□□□ 0.84
CBX1P83916 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC20.32■□□□□ 0.84
CBX1P83916 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
CBX1P83916 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CBX1P83916 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
CBX1P83916 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CBX1P83916 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.32■□□□□ 0.84
CBX1P83916 CD37-204ENST00000535669 1674 ntTSL 2 BASIC20.32■□□□□ 0.84
CBX1P83916 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CBX1P83916 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CBX1P83916 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CBX1P83916 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC20.31■□□□□ 0.84
CBX1P83916 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
CBX1P83916 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CBX1P83916 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
CBX1P83916 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC20.31■□□□□ 0.84
CBX1P83916 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC20.31■□□□□ 0.84
CBX1P83916 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CBX1P83916 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC20.31■□□□□ 0.84
CBX1P83916 KRT18P24-201ENST00000344739 1156 ntBASIC20.31■□□□□ 0.84
CBX1P83916 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC20.31■□□□□ 0.84
CBX1P83916 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CBX1P83916 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC20.31■□□□□ 0.84
CBX1P83916 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
CBX1P83916 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CBX1P83916 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC20.31■□□□□ 0.84
CBX1P83916 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CBX1P83916 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms