Protein–RNA interactions for Protein: P83369

LSM11, U7 snRNA-associated Sm-like protein LSm11, humanhuman

Known RBP eCLIP

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM11P83369 NEK9-207ENST00000555763 837 ntTSL 37.39□□□□□ -1.234e-6■■□□□ 11.5
LSM11P83369 QARS-220ENST00000487495 451 ntTSL 37.07□□□□□ -1.284e-6■■□□□ 11.5
LSM11P83369 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC6.18□□□□□ -1.424e-6■■□□□ 11.5
LSM11P83369 CLK1-210ENST00000473565 3208 ntTSL 1 (best)5.84□□□□□ -1.485e-9■■□□□ 11.5
LSM11P83369 CLK1-207ENST00000461981 3173 ntTSL 25.31□□□□□ -1.565e-9■■□□□ 11.5
LSM11P83369 CFB-284ENST00000498317 589 ntTSL 27.46□□□□□ -1.221e-8■■□□□ 11.5
LSM11P83369 FANCA-208ENST00000561722 696 ntTSL 311.21□□□□□ -0.614e-7■■□□□ 11.5
LSM11P83369 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC15.24■□□□□ 0.035e-7■■□□□ 11.5
LSM11P83369 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.045e-7■■□□□ 11.5
LSM11P83369 LAMA5-211ENST00000492698 894 ntTSL 311.42□□□□□ -0.583e-8■■□□□ 11.5
LSM11P83369 PPIL2-207ENST00000462188 1735 ntTSL 215.2■□□□□ 0.028e-8■■□□□ 11.5
LSM11P83369 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC14.3□□□□□ -0.128e-8■■□□□ 11.5
LSM11P83369 PPIL2-205ENST00000446951 1926 ntTSL 1 (best)13.74□□□□□ -0.218e-8■■□□□ 11.5
LSM11P83369 PPIL2-201ENST00000335025 4929 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.78e-8■■□□□ 11.5
LSM11P83369 PPIL2-204ENST00000417788 4213 ntTSL 29.25□□□□□ -0.938e-8■■□□□ 11.5
LSM11P83369 PPIL2-203ENST00000406385 3875 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.988e-8■■□□□ 11.5
LSM11P83369 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.652e-7■■□□□ 11.5
LSM11P83369 UBC-206ENST00000538617 1303 ntTSL 5 BASIC15.99■□□□□ 0.152e-7■■□□□ 11.5
LSM11P83369 UBC-208ENST00000540700 627 ntTSL 214.98□□□□□ -0.012e-7■■□□□ 11.5
LSM11P83369 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC14.41□□□□□ -0.12e-7■■□□□ 11.5
LSM11P83369 UBC-204ENST00000536661 624 ntTSL 212.92□□□□□ -0.342e-7■■□□□ 11.5
LSM11P83369 UBC-214ENST00000546271 559 ntTSL 410.41□□□□□ -0.742e-7■■□□□ 11.5
LSM11P83369 UBC-213ENST00000546120 718 ntTSL 5 BASIC9.24□□□□□ -0.932e-7■■□□□ 11.5
LSM11P83369 UBC-211ENST00000542416 517 ntTSL 47.92□□□□□ -1.142e-7■■□□□ 11.5
LSM11P83369 PRPF6-201ENST00000266079 3044 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.563e-6■■□□□ 11.5
LSM11P83369 GATD1-216ENST00000534603 863 ntTSL 1 (best)14.67□□□□□ -0.061e-6■■□□□ 11.5
LSM11P83369 GATD1-212ENST00000530209 600 ntTSL 412.03□□□□□ -0.481e-6■■□□□ 11.5
LSM11P83369 GATD1-211ENST00000529966 800 ntTSL 1 (best)12.01□□□□□ -0.491e-6■■□□□ 11.5
LSM11P83369 ABCD4-210ENST00000481348 1177 ntTSL 511.64□□□□□ -0.553e-8■■□□□ 11.5
LSM11P83369 ABCD4-223ENST00000555904 582 ntTSL 311.2□□□□□ -0.623e-8■■□□□ 11.5
LSM11P83369 ABCD4-225ENST00000556517 947 ntTSL 311.2□□□□□ -0.623e-8■■□□□ 11.5
LSM11P83369 NONO-202ENST00000373841 2606 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.642e-6■■□□□ 11.5
LSM11P83369 NONO-201ENST00000276079 2713 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.892e-6■■□□□ 11.5
LSM11P83369 NONO-215ENST00000535149 2882 ntTSL 2 BASIC9.33□□□□□ -0.922e-6■■□□□ 11.5
LSM11P83369 NONO-214ENST00000490044 3215 ntTSL 26.79□□□□□ -1.322e-6■■□□□ 11.5
LSM11P83369 GCKR-202ENST00000411584 789 ntTSL 312.01□□□□□ -0.494e-7■■□□□ 11.5
LSM11P83369 ARGLU1-204ENST00000472226 1336 ntTSL 215.43■□□□□ 0.062e-6■■□□□ 11.5
LSM11P83369 ABO-201ENST00000453660 6341 ntTSL 1 (best)11.56□□□□□ -0.561e-6■■□□□ 11.5
LSM11P83369 RBM39-241ENST00000496183 632 ntTSL 211.9□□□□□ -0.55e-15■■□□□ 11.5
LSM11P83369 RBM39-233ENST00000482563 1737 ntTSL 29.06□□□□□ -0.965e-15■■□□□ 11.5
LSM11P83369 SNHG4-204ENST00000507197 865 ntTSL 2 BASIC11.23□□□□□ -0.612e-6■■□□□ 11.5
LSM11P83369 GOLGA8B-209ENST00000568555 2328 ntTSL 1 (best)12.9□□□□□ -0.347e-8■■□□□ 11.4
LSM11P83369 ARHGAP4-212ENST00000454164 747 ntTSL 519.11■□□□□ 0.652e-6■■□□□ 11.4
LSM11P83369 ARHGAP4-215ENST00000461739 614 ntTSL 318.41■□□□□ 0.542e-6■■□□□ 11.4
LSM11P83369 ARHGAP4-210ENST00000442172 880 ntTSL 318.38■□□□□ 0.532e-6■■□□□ 11.4
LSM11P83369 ARHGAP4-218ENST00000467421 798 ntTSL 216.81■□□□□ 0.282e-6■■□□□ 11.4
LSM11P83369 FANCA-209ENST00000562424 745 ntTSL 212.18□□□□□ -0.462e-8■■□□□ 11.4
LSM11P83369 IDH3B-209ENST00000488299 1620 ntTSL 215.76■□□□□ 0.112e-16■■□□□ 11.4
LSM11P83369 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.022e-16■■□□□ 11.4
LSM11P83369 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.122e-16■■□□□ 11.4
LSM11P83369 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.232e-16■■□□□ 11.4
LSM11P83369 IDH3B-207ENST00000477689 608 ntTSL 512.15□□□□□ -0.462e-16■■□□□ 11.4
LSM11P83369 IDH3B-204ENST00000466494 677 ntTSL 210.38□□□□□ -0.752e-16■■□□□ 11.4
LSM11P83369 IDH3B-211ENST00000492240 964 ntTSL 58.91□□□□□ -0.982e-16■■□□□ 11.4
LSM11P83369 ABCC2-202ENST00000370449 5312 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.036e-10■■□□□ 11.4
LSM11P83369 FUS-208ENST00000564766 791 ntTSL 28.74□□□□□ -1.013e-8■■□□□ 11.4
LSM11P83369 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC19.86■□□□□ 0.772e-7■■□□□ 11.4
LSM11P83369 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.682e-7■■□□□ 11.4
LSM11P83369 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.542e-7■■□□□ 11.4
LSM11P83369 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.322e-7■■□□□ 11.4
LSM11P83369 SLC25A39-215ENST00000592372 867 ntTSL 314.81□□□□□ -0.042e-7■■□□□ 11.4
LSM11P83369 SLC25A39-217ENST00000593166 797 ntTSL 313.91□□□□□ -0.182e-7■■□□□ 11.4
LSM11P83369 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC13.53□□□□□ -0.242e-7■■□□□ 11.4
LSM11P83369 SLC25A39-211ENST00000588767 807 ntTSL 513.12□□□□□ -0.312e-7■■□□□ 11.4
LSM11P83369 SLC25A39-213ENST00000591006 2217 ntTSL 212.53□□□□□ -0.42e-7■■□□□ 11.4
LSM11P83369 RBM39-230ENST00000476806 754 ntTSL 510.62□□□□□ -0.714e-15■■□□□ 11.4
LSM11P83369 RPL10-217ENST00000492572 1656 ntTSL 515.93■□□□□ 0.143e-6■■□□□ 11.4
LSM11P83369 RPL10-218ENST00000618723 2210 ntTSL 5 BASIC12.03□□□□□ -0.483e-6■■□□□ 11.4
LSM11P83369 RPL10-210ENST00000458500 585 ntTSL 1 (best)11.61□□□□□ -0.553e-6■■□□□ 11.4
LSM11P83369 RPL10-202ENST00000369817 1284 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.583e-6■■□□□ 11.4
LSM11P83369 RPL10-204ENST00000424325 2318 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.583e-6■■□□□ 11.4
LSM11P83369 RPL10-215ENST00000489200 1519 ntTSL 210.84□□□□□ -0.673e-6■■□□□ 11.4
LSM11P83369 RPL10-207ENST00000436473 657 ntTSL 210.54□□□□□ -0.723e-6■■□□□ 11.4
LSM11P83369 RPL10-214ENST00000485196 839 ntTSL 210.33□□□□□ -0.763e-6■■□□□ 11.4
LSM11P83369 RPL10-213ENST00000482732 1731 ntTSL 1 (best)10.3□□□□□ -0.763e-6■■□□□ 11.4
LSM11P83369 RPL10-201ENST00000344746 2278 ntAPPRIS P1 TSL 1 (best)10.24□□□□□ -0.773e-6■■□□□ 11.4
LSM11P83369 RPL10-216ENST00000491035 1369 ntTSL 59.7□□□□□ -0.863e-6■■□□□ 11.4
LSM11P83369 RPL10-211ENST00000467168 802 ntTSL 29.2□□□□□ -0.943e-6■■□□□ 11.4
LSM11P83369 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.512e-6■■□□□ 11.4
LSM11P83369 AP1G2-211ENST00000554477 592 ntTSL 39.32□□□□□ -0.925e-9■■□□□ 11.4
LSM11P83369 MXD3-205ENST00000503473 2279 ntTSL 524.29■■□□□ 1.481e-6■■□□□ 11.4
LSM11P83369 CDK5RAP3-225ENST00000582482 2455 ntTSL 210.25□□□□□ -0.772e-10■■□□□ 11.4
LSM11P83369 SEMA4G-205ENST00000517724 2675 ntTSL 1 (best) BASIC9.98□□□□□ -0.817e-16■■□□□ 11.4
LSM11P83369 AC215219.1-201ENST00000400706 1817 ntBASIC13.59□□□□□ -0.237e-7■■□□□ 11.4
LSM11P83369 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC17.96■□□□□ 0.474e-6■■□□□ 11.4
LSM11P83369 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.024e-6■■□□□ 11.4
LSM11P83369 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.83□□□□□ -0.044e-6■■□□□ 11.4
LSM11P83369 PSME4-201ENST00000389993 6581 ntTSL 1 (best)13.26□□□□□ -0.292e-11■■□□□ 11.4
LSM11P83369 SRRM1-201ENST00000323848 4011 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.362e-11■■□□□ 11.4
LSM11P83369 MGEA5-211ENST00000494347 712 ntTSL 212.44□□□□□ -0.424e-6■■□□□ 11.4
LSM11P83369 MAN2C1-220ENST00000564785 4820 ntTSL 512.38□□□□□ -0.431e-7■■□□□ 11.4
LSM11P83369 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.442e-11■■□□□ 11.4
LSM11P83369 PSME4-206ENST00000476586 1422 ntTSL 1 (best)10.27□□□□□ -0.772e-11■■□□□ 11.4
LSM11P83369 MGEA5-207ENST00000462994 1088 ntTSL 29.98□□□□□ -0.814e-6■■□□□ 11.4
LSM11P83369 MGEA5-209ENST00000482611 1664 ntTSL 1 (best)7.36□□□□□ -1.234e-6■■□□□ 11.4
LSM11P83369 PSME4-209ENST00000488687 3073 ntTSL 26.2□□□□□ -1.422e-11■■□□□ 11.4
LSM11P83369 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.692e-11■■□□□ 11.4
LSM11P83369 SLC17A9-204ENST00000459704 2015 ntTSL 316.02■□□□□ 0.162e-20■■□□□ 11.4
LSM11P83369 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.042e-20■■□□□ 11.4
LSM11P83369 SLC17A9-205ENST00000483113 1624 ntTSL 313.54□□□□□ -0.242e-20■■□□□ 11.4
Retrieved 100 of 11,495 protein–RNA pairs in 50.6 ms