Protein–RNA interactions for Protein: P62306

SNRPF, Small nuclear ribonucleoprotein F, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPFP62306 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
SNRPFP62306 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
SNRPFP62306 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC21.15■□□□□ 0.98
SNRPFP62306 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
SNRPFP62306 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
SNRPFP62306 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SNRPFP62306 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SNRPFP62306 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC21.15■□□□□ 0.98
SNRPFP62306 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SNRPFP62306 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.98
SNRPFP62306 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SNRPFP62306 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
SNRPFP62306 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SNRPFP62306 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SNRPFP62306 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SNRPFP62306 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
SNRPFP62306 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SNRPFP62306 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
SNRPFP62306 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SNRPFP62306 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
SNRPFP62306 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SNRPFP62306 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC21.14■□□□□ 0.97
SNRPFP62306 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
SNRPFP62306 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC21.14■□□□□ 0.97
SNRPFP62306 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC21.14■□□□□ 0.97
SNRPFP62306 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC21.14■□□□□ 0.97
SNRPFP62306 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC21.14■□□□□ 0.97
SNRPFP62306 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC21.14■□□□□ 0.97
SNRPFP62306 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
SNRPFP62306 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SNRPFP62306 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SNRPFP62306 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
SNRPFP62306 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
SNRPFP62306 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SNRPFP62306 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC21.14■□□□□ 0.97
SNRPFP62306 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SNRPFP62306 AC116562.4-201ENST00000641316 2276 ntBASIC21.13■□□□□ 0.97
SNRPFP62306 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
SNRPFP62306 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
SNRPFP62306 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
SNRPFP62306 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SNRPFP62306 AP002982.1-201ENST00000492365 877 ntBASIC21.13■□□□□ 0.97
SNRPFP62306 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
SNRPFP62306 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
SNRPFP62306 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC21.13■□□□□ 0.97
SNRPFP62306 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC21.13■□□□□ 0.97
SNRPFP62306 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SNRPFP62306 AL032819.2-201ENST00000624543 2162 ntBASIC21.13■□□□□ 0.97
SNRPFP62306 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
SNRPFP62306 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
SNRPFP62306 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SNRPFP62306 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SNRPFP62306 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC21.12■□□□□ 0.97
SNRPFP62306 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC21.12■□□□□ 0.97
SNRPFP62306 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC21.12■□□□□ 0.97
SNRPFP62306 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SNRPFP62306 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC21.12■□□□□ 0.97
SNRPFP62306 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SNRPFP62306 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SNRPFP62306 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC21.12■□□□□ 0.97
SNRPFP62306 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SNRPFP62306 SPIB-206ENST00000596074 847 ntTSL 2 BASIC21.12■□□□□ 0.97
SNRPFP62306 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC21.12■□□□□ 0.97
SNRPFP62306 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC21.12■□□□□ 0.97
SNRPFP62306 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SNRPFP62306 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC21.12■□□□□ 0.97
SNRPFP62306 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SNRPFP62306 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC21.12■□□□□ 0.97
SNRPFP62306 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SNRPFP62306 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SNRPFP62306 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC21.11■□□□□ 0.97
SNRPFP62306 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC21.11■□□□□ 0.97
SNRPFP62306 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC21.11■□□□□ 0.97
SNRPFP62306 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SNRPFP62306 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SNRPFP62306 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SNRPFP62306 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SNRPFP62306 FDX2-207ENST00000494368 584 ntTSL 4 BASIC21.11■□□□□ 0.97
SNRPFP62306 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC21.11■□□□□ 0.97
SNRPFP62306 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
SNRPFP62306 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC21.11■□□□□ 0.97
SNRPFP62306 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC21.11■□□□□ 0.97
SNRPFP62306 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC21.11■□□□□ 0.97
SNRPFP62306 AF186192.3-201ENST00000583427 947 ntBASIC21.11■□□□□ 0.97
SNRPFP62306 AC073195.1-201ENST00000607241 877 ntBASIC21.11■□□□□ 0.97
SNRPFP62306 AC131212.4-201ENST00000623606 975 ntBASIC21.11■□□□□ 0.97
SNRPFP62306 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
SNRPFP62306 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC21.11■□□□□ 0.97
SNRPFP62306 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SNRPFP62306 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SNRPFP62306 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SNRPFP62306 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SNRPFP62306 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
SNRPFP62306 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
SNRPFP62306 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SNRPFP62306 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
SNRPFP62306 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC21.1■□□□□ 0.97
SNRPFP62306 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SNRPFP62306 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
SNRPFP62306 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms