Protein–RNA interactions for Protein: P49768

PSEN1, Presenilin-1, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1P49768 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PSEN1P49768 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
PSEN1P49768 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
PSEN1P49768 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
PSEN1P49768 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
PSEN1P49768 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC20.59■□□□□ 0.89
PSEN1P49768 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PSEN1P49768 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC20.59■□□□□ 0.89
PSEN1P49768 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC20.59■□□□□ 0.89
PSEN1P49768 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PSEN1P49768 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
PSEN1P49768 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC20.59■□□□□ 0.89
PSEN1P49768 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PSEN1P49768 AC090142.2-201ENST00000483263 416 ntBASIC20.59■□□□□ 0.89
PSEN1P49768 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC20.59■□□□□ 0.89
PSEN1P49768 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC20.59■□□□□ 0.89
PSEN1P49768 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PSEN1P49768 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC20.59■□□□□ 0.89
PSEN1P49768 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PSEN1P49768 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.59■□□□□ 0.89
PSEN1P49768 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
PSEN1P49768 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PSEN1P49768 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
PSEN1P49768 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PSEN1P49768 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.58■□□□□ 0.89
PSEN1P49768 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.58■□□□□ 0.89
PSEN1P49768 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC20.58■□□□□ 0.89
PSEN1P49768 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC20.58■□□□□ 0.89
PSEN1P49768 HTR7P1-201ENST00000538670 1336 ntBASIC20.58■□□□□ 0.89
PSEN1P49768 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
PSEN1P49768 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PSEN1P49768 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PSEN1P49768 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PSEN1P49768 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
PSEN1P49768 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PSEN1P49768 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC20.58■□□□□ 0.89
PSEN1P49768 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PSEN1P49768 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PSEN1P49768 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
PSEN1P49768 MDFI-202ENST00000373050 809 ntTSL 2 BASIC20.58■□□□□ 0.89
PSEN1P49768 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC20.58■□□□□ 0.89
PSEN1P49768 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PSEN1P49768 MTND2P7-201ENST00000521337 640 ntBASIC20.58■□□□□ 0.89
PSEN1P49768 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC20.58■□□□□ 0.88
PSEN1P49768 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
PSEN1P49768 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
PSEN1P49768 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PSEN1P49768 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
PSEN1P49768 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC20.57■□□□□ 0.88
PSEN1P49768 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
PSEN1P49768 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC20.57■□□□□ 0.88
PSEN1P49768 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PSEN1P49768 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
PSEN1P49768 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
PSEN1P49768 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PSEN1P49768 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
PSEN1P49768 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC20.57■□□□□ 0.88
PSEN1P49768 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
PSEN1P49768 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC20.57■□□□□ 0.88
PSEN1P49768 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC20.57■□□□□ 0.88
PSEN1P49768 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
PSEN1P49768 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC20.57■□□□□ 0.88
PSEN1P49768 RN7SL275P-201ENST00000582762 335 ntBASIC20.57■□□□□ 0.88
PSEN1P49768 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC20.57■□□□□ 0.88
PSEN1P49768 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC20.57■□□□□ 0.88
PSEN1P49768 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC20.57■□□□□ 0.88
PSEN1P49768 AL353708.3-201ENST00000610272 989 ntBASIC20.57■□□□□ 0.88
PSEN1P49768 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC20.57■□□□□ 0.88
PSEN1P49768 AL049637.2-201ENST00000641778 930 ntBASIC20.57■□□□□ 0.88
PSEN1P49768 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
PSEN1P49768 GOLGA6L3-201ENST00000507199 1679 ntBASIC20.57■□□□□ 0.88
PSEN1P49768 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PSEN1P49768 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PSEN1P49768 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC20.56■□□□□ 0.88
PSEN1P49768 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PSEN1P49768 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PSEN1P49768 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
PSEN1P49768 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
PSEN1P49768 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PSEN1P49768 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PSEN1P49768 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PSEN1P49768 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
PSEN1P49768 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
PSEN1P49768 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
PSEN1P49768 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PSEN1P49768 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC20.56■□□□□ 0.88
PSEN1P49768 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PSEN1P49768 KRT18P16-201ENST00000510337 1294 ntBASIC20.56■□□□□ 0.88
PSEN1P49768 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PSEN1P49768 AF186192.3-201ENST00000583427 947 ntBASIC20.56■□□□□ 0.88
PSEN1P49768 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC20.56■□□□□ 0.88
PSEN1P49768 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC20.56■□□□□ 0.88
PSEN1P49768 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PSEN1P49768 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PSEN1P49768 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC20.56■□□□□ 0.88
PSEN1P49768 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC20.56■□□□□ 0.88
PSEN1P49768 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC20.56■□□□□ 0.88
PSEN1P49768 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PSEN1P49768 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.56■□□□□ 0.88
PSEN1P49768 AL139384.1-201ENST00000612143 3047 ntBASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms