Protein–RNA interactions for Protein: P48668

KRT6C, Keratin, type II cytoskeletal 6C, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6CP48668 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
KRT6CP48668 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
KRT6CP48668 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
KRT6CP48668 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
KRT6CP48668 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC18.82■□□□□ 0.6
KRT6CP48668 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.81■□□□□ 0.6
KRT6CP48668 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
KRT6CP48668 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
KRT6CP48668 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
KRT6CP48668 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
KRT6CP48668 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
KRT6CP48668 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
KRT6CP48668 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.81■□□□□ 0.6
KRT6CP48668 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
KRT6CP48668 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
KRT6CP48668 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC18.81■□□□□ 0.6
KRT6CP48668 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC18.81■□□□□ 0.6
KRT6CP48668 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
KRT6CP48668 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
KRT6CP48668 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
KRT6CP48668 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC18.81■□□□□ 0.6
KRT6CP48668 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC18.81■□□□□ 0.6
KRT6CP48668 ABHD17AP6-201ENST00000458502 1044 ntBASIC18.81■□□□□ 0.6
KRT6CP48668 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC18.81■□□□□ 0.6
KRT6CP48668 TK2-208ENST00000545043 1120 ntTSL 2 BASIC18.81■□□□□ 0.6
KRT6CP48668 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC18.81■□□□□ 0.6
KRT6CP48668 AC060766.5-201ENST00000590539 871 ntBASIC18.81■□□□□ 0.6
KRT6CP48668 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
KRT6CP48668 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
KRT6CP48668 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
KRT6CP48668 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC18.81■□□□□ 0.6
KRT6CP48668 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
KRT6CP48668 AC124283.5-201ENST00000624661 1809 ntBASIC18.81■□□□□ 0.6
KRT6CP48668 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
KRT6CP48668 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
KRT6CP48668 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
KRT6CP48668 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
KRT6CP48668 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
KRT6CP48668 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
KRT6CP48668 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
KRT6CP48668 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
KRT6CP48668 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC18.8■□□□□ 0.6
KRT6CP48668 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC18.8■□□□□ 0.6
KRT6CP48668 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
KRT6CP48668 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
KRT6CP48668 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
KRT6CP48668 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
KRT6CP48668 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
KRT6CP48668 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
KRT6CP48668 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
KRT6CP48668 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
KRT6CP48668 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
KRT6CP48668 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
KRT6CP48668 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
KRT6CP48668 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
KRT6CP48668 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.79■□□□□ 0.6
KRT6CP48668 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
KRT6CP48668 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
KRT6CP48668 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.79■□□□□ 0.6
KRT6CP48668 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
KRT6CP48668 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
KRT6CP48668 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
KRT6CP48668 PNMA6B-201ENST00000538162 1200 ntBASIC18.79■□□□□ 0.6
KRT6CP48668 GXYLT1P5-201ENST00000614548 1189 ntBASIC18.79■□□□□ 0.6
KRT6CP48668 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC18.79■□□□□ 0.6
KRT6CP48668 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
KRT6CP48668 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
KRT6CP48668 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
KRT6CP48668 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.79■□□□□ 0.6
KRT6CP48668 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.79■□□□□ 0.6
KRT6CP48668 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
KRT6CP48668 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
KRT6CP48668 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
KRT6CP48668 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
KRT6CP48668 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.79■□□□□ 0.6
KRT6CP48668 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
KRT6CP48668 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
KRT6CP48668 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.78■□□□□ 0.6
KRT6CP48668 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
KRT6CP48668 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
KRT6CP48668 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
KRT6CP48668 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.78■□□□□ 0.6
KRT6CP48668 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
KRT6CP48668 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
KRT6CP48668 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC18.78■□□□□ 0.6
KRT6CP48668 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC18.78■□□□□ 0.6
KRT6CP48668 AL138781.1-201ENST00000566567 1274 ntBASIC18.78■□□□□ 0.6
KRT6CP48668 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
KRT6CP48668 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC18.78■□□□□ 0.6
KRT6CP48668 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC18.78■□□□□ 0.6
KRT6CP48668 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC18.78■□□□□ 0.6
KRT6CP48668 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
KRT6CP48668 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
KRT6CP48668 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
KRT6CP48668 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
KRT6CP48668 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.78■□□□□ 0.6
KRT6CP48668 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
KRT6CP48668 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
KRT6CP48668 AP006587.1-201ENST00000534129 1502 ntBASIC18.78■□□□□ 0.6
KRT6CP48668 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms