Protein–RNA interactions for Protein: P48664

SLC1A6, Excitatory amino acid transporter 4, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A6P48664 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SLC1A6P48664 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SLC1A6P48664 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SLC1A6P48664 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SLC1A6P48664 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SLC1A6P48664 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SLC1A6P48664 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.1■□□□□ 0.65
SLC1A6P48664 LETM1P2-201ENST00000597330 2178 ntBASIC19.1■□□□□ 0.65
SLC1A6P48664 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
SLC1A6P48664 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
SLC1A6P48664 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.1■□□□□ 0.65
SLC1A6P48664 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
SLC1A6P48664 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
SLC1A6P48664 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
SLC1A6P48664 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
SLC1A6P48664 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SLC1A6P48664 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SLC1A6P48664 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
SLC1A6P48664 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SLC1A6P48664 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SLC1A6P48664 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SLC1A6P48664 ZNRF2P3-201ENST00000424200 374 ntBASIC19.09■□□□□ 0.65
SLC1A6P48664 AC116351.2-201ENST00000606540 1585 ntBASIC19.09■□□□□ 0.65
SLC1A6P48664 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
SLC1A6P48664 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
SLC1A6P48664 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
SLC1A6P48664 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SLC1A6P48664 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SLC1A6P48664 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SLC1A6P48664 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SLC1A6P48664 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.08■□□□□ 0.65
SLC1A6P48664 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.65
SLC1A6P48664 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SLC1A6P48664 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SLC1A6P48664 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SLC1A6P48664 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
SLC1A6P48664 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SLC1A6P48664 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
SLC1A6P48664 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.08■□□□□ 0.64
SLC1A6P48664 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
SLC1A6P48664 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC19.08■□□□□ 0.64
SLC1A6P48664 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SLC1A6P48664 DUX4L16-201ENST00000555130 1264 ntBASIC19.08■□□□□ 0.64
SLC1A6P48664 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC19.08■□□□□ 0.64
SLC1A6P48664 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.08■□□□□ 0.64
SLC1A6P48664 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
SLC1A6P48664 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.08■□□□□ 0.64
SLC1A6P48664 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SLC1A6P48664 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.08■□□□□ 0.64
SLC1A6P48664 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
SLC1A6P48664 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
SLC1A6P48664 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
SLC1A6P48664 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SLC1A6P48664 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC19.07■□□□□ 0.64
SLC1A6P48664 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SLC1A6P48664 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.07■□□□□ 0.64
SLC1A6P48664 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
SLC1A6P48664 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
SLC1A6P48664 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
SLC1A6P48664 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.07■□□□□ 0.64
SLC1A6P48664 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
SLC1A6P48664 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SLC1A6P48664 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SLC1A6P48664 LGR4-203ENST00000480977 492 ntTSL 2 BASIC19.07■□□□□ 0.64
SLC1A6P48664 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC19.07■□□□□ 0.64
SLC1A6P48664 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.07■□□□□ 0.64
SLC1A6P48664 AC069236.1-201ENST00000604339 616 ntBASIC19.07■□□□□ 0.64
SLC1A6P48664 AL589743.5-201ENST00000616611 1050 ntBASIC19.07■□□□□ 0.64
SLC1A6P48664 ZNF815P-204ENST00000434898 1737 ntBASIC19.07■□□□□ 0.64
SLC1A6P48664 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SLC1A6P48664 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SLC1A6P48664 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SLC1A6P48664 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.07■□□□□ 0.64
SLC1A6P48664 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SLC1A6P48664 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SLC1A6P48664 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
SLC1A6P48664 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SLC1A6P48664 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
SLC1A6P48664 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SLC1A6P48664 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SLC1A6P48664 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
SLC1A6P48664 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SLC1A6P48664 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SLC1A6P48664 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SLC1A6P48664 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
SLC1A6P48664 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
SLC1A6P48664 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SLC1A6P48664 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SLC1A6P48664 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SLC1A6P48664 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SLC1A6P48664 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SLC1A6P48664 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC19.06■□□□□ 0.64
SLC1A6P48664 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SLC1A6P48664 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
SLC1A6P48664 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
SLC1A6P48664 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SLC1A6P48664 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
SLC1A6P48664 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC19.06■□□□□ 0.64
SLC1A6P48664 AC137761.2-201ENST00000561729 223 ntBASIC19.06■□□□□ 0.64
SLC1A6P48664 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms