Protein–RNA interactions for Protein: P43243

MATR3, Matrin-3, humanhuman

Known RBP eCLIP

Length 847 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3P43243 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.776e-6■■■■□ 20.3
MATR3P43243 RNF114-208ENST00000625177 580 ntTSL 326.06■■□□□ 1.761e-6■■■■□ 20.3
MATR3P43243 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC25.3■■□□□ 1.643e-6■■■■□ 20.3
MATR3P43243 GNB1-207ENST00000472614 708 ntTSL 224.92■■□□□ 1.582e-9■■■■□ 20.3
MATR3P43243 RNF114-203ENST00000622999 2438 ntTSL 223.64■■□□□ 1.381e-6■■■■□ 20.3
MATR3P43243 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC23.59■■□□□ 1.376e-6■■■■□ 20.3
MATR3P43243 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC23.41■■□□□ 1.341e-6■■■■□ 20.3
MATR3P43243 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC23.01■■□□□ 1.276e-6■■■■□ 20.3
MATR3P43243 CTBP2-208ENST00000476817 705 ntTSL 322.82■■□□□ 1.246e-6■■■■□ 20.3
MATR3P43243 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.173e-6■■■■□ 20.3
MATR3P43243 RNF114-204ENST00000623528 624 ntTSL 321.84■■□□□ 1.091e-6■■■■□ 20.3
MATR3P43243 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC21.33■■□□□ 1.016e-6■■■■□ 20.3
MATR3P43243 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC21.29■■□□□ 16e-6■■■■□ 20.3
MATR3P43243 RNF114-206ENST00000624620 565 ntTSL 221.27■■□□□ 11e-6■■■■□ 20.3
MATR3P43243 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.996e-6■■■■□ 20.3
MATR3P43243 FAF2-205ENST00000510730 684 ntTSL 321.16■□□□□ 0.986e-6■■■■□ 20.3
MATR3P43243 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.911e-6■■■■□ 20.3
MATR3P43243 RHOT1-209ENST00000581031 3013 ntTSL 1 (best)20.72■□□□□ 0.916e-6■■■■□ 20.3
MATR3P43243 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.866e-6■■■■□ 20.3
MATR3P43243 AGAP3-207ENST00000467724 826 ntTSL 520.39■□□□□ 0.853e-6■■■■□ 20.3
MATR3P43243 XPO6-213ENST00000568065 942 ntTSL 520.3■□□□□ 0.842e-6■■■■□ 20.3
MATR3P43243 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.836e-6■■■■□ 20.3
MATR3P43243 ZNF10-207ENST00000538918 546 ntTSL 320.05■□□□□ 0.82e-8■■■■□ 20.3
MATR3P43243 AGAP3-225ENST00000498559 581 ntTSL 219.59■□□□□ 0.733e-6■■■■□ 20.3
MATR3P43243 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.686e-6■■■■□ 20.3
MATR3P43243 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.623e-6■■■■□ 20.3
MATR3P43243 RHOT1-215ENST00000583994 3289 ntTSL 218.94■□□□□ 0.626e-6■■■■□ 20.3
MATR3P43243 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC18.25■□□□□ 0.516e-6■■■■□ 20.3
MATR3P43243 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.56e-6■■■■□ 20.3
MATR3P43243 ZNF131-205ENST00000504359 565 ntTSL 417.83■□□□□ 0.446e-6■■■■□ 20.3
MATR3P43243 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC17.75■□□□□ 0.433e-6■■■■□ 20.3
MATR3P43243 ZNF267-204ENST00000562971 567 ntTSL 417.29■□□□□ 0.364e-6■■■■□ 20.3
MATR3P43243 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.352e-6■■■■□ 20.3
MATR3P43243 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.316e-6■■■■□ 20.3
MATR3P43243 ARFIP1-208ENST00000510831 514 ntTSL 316.85■□□□□ 0.294e-8■■■■□ 20.3
MATR3P43243 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC16.75■□□□□ 0.272e-8■■■■□ 20.3
MATR3P43243 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC16.59■□□□□ 0.252e-8■■■■□ 20.3
MATR3P43243 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.146e-8■■■■□ 20.3
MATR3P43243 RBM4-208ENST00000510173 782 ntTSL 315.59■□□□□ 0.093e-6■■■■□ 20.3
MATR3P43243 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.053e-6■■■■□ 20.3
MATR3P43243 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.053e-6■■■■□ 20.3
MATR3P43243 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC15.36■□□□□ 0.052e-8■■■■□ 20.3
MATR3P43243 ZNF131-218ENST00000511736 956 ntTSL 1 (best)15.12■□□□□ 0.016e-6■■■■□ 20.3
MATR3P43243 CPEB1-213ENST00000617462 2068 ntTSL 1 (best) BASIC14.92□□□□□ -0.026e-6■■■■□ 20.3
MATR3P43243 BCL2L11-217ENST00000610735 5120 ntTSL 5 BASIC14.44□□□□□ -0.13e-6■■■■□ 20.3
MATR3P43243 AGAP3-205ENST00000463381 2730 ntTSL 2 BASIC14.41□□□□□ -0.13e-6■■■■□ 20.3
MATR3P43243 AGAP3-226ENST00000622464 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.113e-6■■■■□ 20.3
MATR3P43243 BCL2L11-203ENST00000357757 947 ntTSL 5 BASIC14.34□□□□□ -0.112e-6■■■■□ 20.3
MATR3P43243 ZNF10-208ENST00000540609 648 ntTSL 314.34□□□□□ -0.112e-8■■■■□ 20.3
MATR3P43243 CPEB1-212ENST00000616959 2009 ntTSL 2 BASIC14.22□□□□□ -0.136e-6■■■■□ 20.3
MATR3P43243 ZKSCAN5-202ENST00000394170 4344 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.156e-6■■■■□ 20.3
MATR3P43243 FP671120.1-201ENST00000623664 2498 ntTSL 2 BASIC14.04□□□□□ -0.161e-7■■■■□ 20.3
MATR3P43243 BCL2L11-206ENST00000393256 5086 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.23e-6■■■■□ 20.3
MATR3P43243 BCL2L11-223ENST00000622612 4995 ntTSL 5 BASIC13.71□□□□□ -0.213e-6■■■■□ 20.3
MATR3P43243 ZNF267-205ENST00000566541 589 ntTSL 413.66□□□□□ -0.224e-6■■■■□ 20.3
MATR3P43243 NAA11-203ENST00000513733 584 ntTSL 313.59□□□□□ -0.236e-6■■■■□ 20.3
MATR3P43243 AC026786.1-201ENST00000540096 1374 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.252e-8■■■■□ 20.3
MATR3P43243 BCL2L11-220ENST00000620862 5044 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.283e-6■■■■□ 20.3
MATR3P43243 BCL2L11-218ENST00000615946 5026 ntTSL 5 BASIC13.32□□□□□ -0.283e-6■■■■□ 20.3
MATR3P43243 MUC4-203ENST00000346145 3982 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.286e-6■■■■□ 20.3
MATR3P43243 GDI2-206ENST00000456041 918 ntTSL 513.25□□□□□ -0.296e-8■■■■□ 20.3
MATR3P43243 ZNF10-204ENST00000536704 531 ntTSL 413.07□□□□□ -0.322e-8■■■■□ 20.3
MATR3P43243 BCL2L11-209ENST00000431217 883 ntTSL 313.04□□□□□ -0.323e-6■■■■□ 20.3
MATR3P43243 BCL2L11-212ENST00000436733 618 ntTSL 1 (best)13.04□□□□□ -0.323e-6■■■■□ 20.3
MATR3P43243 BCL2L11-213ENST00000437029 729 ntTSL 1 (best)13.04□□□□□ -0.323e-6■■■■□ 20.3
MATR3P43243 ZNF131-220ENST00000515326 1050 ntTSL 1 (best)12.9□□□□□ -0.346e-6■■■■□ 20.3
MATR3P43243 ZNF131-216ENST00000510026 2599 ntTSL 512.87□□□□□ -0.356e-6■■■■□ 20.3
MATR3P43243 CTBP2-203ENST00000337195 6939 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.376e-6■■■■□ 20.3
MATR3P43243 MUC4-204ENST00000349607 3829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.386e-6■■■■□ 20.3
MATR3P43243 AGAP3-213ENST00000475145 413 ntTSL 212.66□□□□□ -0.383e-6■■■■□ 20.3
MATR3P43243 CPEB1-208ENST00000611163 1919 ntTSL 2 BASIC12.6□□□□□ -0.396e-6■■■■□ 20.3
MATR3P43243 PRKCB-207ENST00000486868 467 ntTSL 312.55□□□□□ -0.46e-6■■■■□ 20.3
MATR3P43243 XPO6-208ENST00000565698 4255 ntTSL 2 BASIC12.45□□□□□ -0.422e-6■■■■□ 20.3
MATR3P43243 GDI2-202ENST00000380181 1408 ntTSL 1 (best) BASIC12.4□□□□□ -0.426e-8■■■■□ 20.3
MATR3P43243 ZNF10-210ENST00000543271 559 ntTSL 412.21□□□□□ -0.452e-8■■■■□ 20.3
MATR3P43243 CPEB1-216ENST00000618449 2459 ntTSL 1 (best) BASIC12.18□□□□□ -0.466e-6■■■■□ 20.3
MATR3P43243 ZKSCAN5-204ENST00000454175 5626 ntTSL 1 (best)12.03□□□□□ -0.486e-6■■■■□ 20.3
MATR3P43243 CPEB1-210ENST00000614977 1559 ntTSL 211.85□□□□□ -0.516e-6■■■■□ 20.3
MATR3P43243 ZNF131-212ENST00000509156 2063 ntTSL 2 BASIC11.83□□□□□ -0.516e-6■■■■□ 20.3
MATR3P43243 CPEB1-215ENST00000617958 2776 ntTSL 1 (best) BASIC11.79□□□□□ -0.526e-6■■■■□ 20.3
MATR3P43243 ZNF267-202ENST00000394846 680 ntTSL 2 BASIC11.53□□□□□ -0.564e-6■■■■□ 20.3
MATR3P43243 NLRP1-209ENST00000572143 578 ntTSL 411.53□□□□□ -0.562e-7■■■■□ 20.3
MATR3P43243 ZNF131-213ENST00000509341 572 ntTSL 511.47□□□□□ -0.576e-6■■■■□ 20.3
MATR3P43243 ARFIP1-205ENST00000451320 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.62e-8■■■■□ 20.3
MATR3P43243 RHOT1-210ENST00000581094 3231 ntTSL 2 BASIC11.3□□□□□ -0.66e-6■■■■□ 20.3
MATR3P43243 CTBP2-212ENST00000530884 578 ntTSL 311.25□□□□□ -0.616e-6■■■■□ 20.3
MATR3P43243 NLRP1-213ENST00000576905 555 ntTSL 411.25□□□□□ -0.612e-7■■■■□ 20.3
MATR3P43243 CPEB1-207ENST00000611031 3074 ntAPPRIS ALT1 TSL 5 BASIC11.18□□□□□ -0.626e-6■■■■□ 20.3
MATR3P43243 ARFIP1-201ENST00000353617 3111 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.652e-8■■■■□ 20.3
MATR3P43243 ZNF267-201ENST00000300870 3317 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.74e-6■■■■□ 20.3
MATR3P43243 CPEB1-217ENST00000618698 2885 ntTSL 210.51□□□□□ -0.736e-6■■■■□ 20.3
MATR3P43243 ZNF10-203ENST00000426665 2169 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.732e-8■■■■□ 20.3
MATR3P43243 AC245033.1-201ENST00000562833 880 ntAPPRIS P1 TSL 3 BASIC10.45□□□□□ -0.746e-6■■■■□ 20.3
MATR3P43243 CPEB1-209ENST00000614918 4882 ntTSL 5 BASIC10.37□□□□□ -0.756e-6■■■■□ 20.3
MATR3P43243 ZNF10-209ENST00000540927 590 ntTSL 49.67□□□□□ -0.862e-8■■■■□ 20.3
MATR3P43243 AGAP3-208ENST00000468796 540 ntTSL 49.61□□□□□ -0.873e-6■■■■□ 20.3
MATR3P43243 BCL2L11-215ENST00000439718 936 ntTSL 1 (best)9.57□□□□□ -0.883e-6■■■■□ 20.3
MATR3P43243 SMYD3-212ENST00000483072 466 ntTSL 29.46□□□□□ -0.96e-6■■■■□ 20.3
MATR3P43243 ZKSCAN5-203ENST00000451158 3111 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.96e-6■■■■□ 20.3
MATR3P43243 ZKSCAN5-201ENST00000326775 4178 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.956e-6■■■■□ 20.3
Retrieved 100 of 16,209 protein–RNA pairs in 69.2 ms