Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 FSCN1P1-201ENST00000568912 1481 ntBASIC19.99■□□□□ 0.79
SLC6A4P31645 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.98■□□□□ 0.79
SLC6A4P31645 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.98■□□□□ 0.79
SLC6A4P31645 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SLC6A4P31645 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
SLC6A4P31645 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SLC6A4P31645 UNC93B2-201ENST00000285383 730 ntBASIC19.98■□□□□ 0.79
SLC6A4P31645 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC19.98■□□□□ 0.79
SLC6A4P31645 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.98■□□□□ 0.79
SLC6A4P31645 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC19.98■□□□□ 0.79
SLC6A4P31645 AC087499.1-201ENST00000418141 1075 ntBASIC19.98■□□□□ 0.79
SLC6A4P31645 PTPA-216ENST00000432651 857 ntTSL 2 BASIC19.98■□□□□ 0.79
SLC6A4P31645 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.98■□□□□ 0.79
SLC6A4P31645 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC19.98■□□□□ 0.79
SLC6A4P31645 AL160286.2-201ENST00000567150 934 ntBASIC19.98■□□□□ 0.79
SLC6A4P31645 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.98■□□□□ 0.79
SLC6A4P31645 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
SLC6A4P31645 KRT8P9-201ENST00000558927 1449 ntBASIC19.98■□□□□ 0.79
SLC6A4P31645 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SLC6A4P31645 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SLC6A4P31645 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC19.98■□□□□ 0.79
SLC6A4P31645 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SLC6A4P31645 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.97■□□□□ 0.79
SLC6A4P31645 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC19.97■□□□□ 0.79
SLC6A4P31645 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SLC6A4P31645 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SLC6A4P31645 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
SLC6A4P31645 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC19.97■□□□□ 0.79
SLC6A4P31645 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SLC6A4P31645 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
SLC6A4P31645 AL390955.1-201ENST00000428694 934 ntBASIC19.97■□□□□ 0.79
SLC6A4P31645 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SLC6A4P31645 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SLC6A4P31645 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC19.97■□□□□ 0.79
SLC6A4P31645 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC19.97■□□□□ 0.79
SLC6A4P31645 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
SLC6A4P31645 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SLC6A4P31645 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
SLC6A4P31645 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SLC6A4P31645 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
SLC6A4P31645 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
SLC6A4P31645 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SLC6A4P31645 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.96■□□□□ 0.79
SLC6A4P31645 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.96■□□□□ 0.79
SLC6A4P31645 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SLC6A4P31645 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
SLC6A4P31645 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SLC6A4P31645 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
SLC6A4P31645 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
SLC6A4P31645 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.96■□□□□ 0.79
SLC6A4P31645 ANKRD18DP-204ENST00000455355 1975 ntBASIC19.96■□□□□ 0.79
SLC6A4P31645 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SLC6A4P31645 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
SLC6A4P31645 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
SLC6A4P31645 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
SLC6A4P31645 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC19.96■□□□□ 0.79
SLC6A4P31645 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
SLC6A4P31645 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC19.96■□□□□ 0.79
SLC6A4P31645 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SLC6A4P31645 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.96■□□□□ 0.79
SLC6A4P31645 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
SLC6A4P31645 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SLC6A4P31645 AC130371.2-201ENST00000619443 611 ntBASIC19.96■□□□□ 0.79
SLC6A4P31645 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC19.96■□□□□ 0.79
SLC6A4P31645 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SLC6A4P31645 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
SLC6A4P31645 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SLC6A4P31645 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.79
SLC6A4P31645 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.95■□□□□ 0.79
SLC6A4P31645 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SLC6A4P31645 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SLC6A4P31645 TREX1-205ENST00000625293 1783 ntBASIC19.95■□□□□ 0.78
SLC6A4P31645 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
SLC6A4P31645 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.95■□□□□ 0.78
SLC6A4P31645 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SLC6A4P31645 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.95■□□□□ 0.78
SLC6A4P31645 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.95■□□□□ 0.78
SLC6A4P31645 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SLC6A4P31645 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SLC6A4P31645 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SLC6A4P31645 MIR1238-201ENST00000408483 83 ntBASIC19.95■□□□□ 0.78
SLC6A4P31645 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.95■□□□□ 0.78
SLC6A4P31645 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SLC6A4P31645 AC211429.1-201ENST00000415277 523 ntBASIC19.95■□□□□ 0.78
SLC6A4P31645 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC19.95■□□□□ 0.78
SLC6A4P31645 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SLC6A4P31645 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
SLC6A4P31645 AC011298.2-201ENST00000617989 482 ntBASIC19.95■□□□□ 0.78
SLC6A4P31645 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SLC6A4P31645 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
SLC6A4P31645 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.95■□□□□ 0.78
SLC6A4P31645 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.94■□□□□ 0.78
SLC6A4P31645 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SLC6A4P31645 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC19.94■□□□□ 0.78
SLC6A4P31645 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC19.94■□□□□ 0.78
SLC6A4P31645 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
SLC6A4P31645 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SLC6A4P31645 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SLC6A4P31645 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SLC6A4P31645 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms