Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC17.92■□□□□ 0.46
ABCD3P28288 MDFI-202ENST00000373050 809 ntTSL 2 BASIC17.92■□□□□ 0.46
ABCD3P28288 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC17.92■□□□□ 0.46
ABCD3P28288 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
ABCD3P28288 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC17.92■□□□□ 0.46
ABCD3P28288 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC17.92■□□□□ 0.46
ABCD3P28288 RPS15-203ENST00000586096 570 ntTSL 2 BASIC17.92■□□□□ 0.46
ABCD3P28288 AP001412.1-201ENST00000608405 714 ntBASIC17.92■□□□□ 0.46
ABCD3P28288 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC17.92■□□□□ 0.46
ABCD3P28288 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ABCD3P28288 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
ABCD3P28288 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC17.92■□□□□ 0.46
ABCD3P28288 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ABCD3P28288 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC17.91■□□□□ 0.46
ABCD3P28288 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ABCD3P28288 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
ABCD3P28288 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC17.91■□□□□ 0.46
ABCD3P28288 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
ABCD3P28288 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ABCD3P28288 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ABCD3P28288 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ABCD3P28288 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
ABCD3P28288 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC17.91■□□□□ 0.46
ABCD3P28288 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ABCD3P28288 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
ABCD3P28288 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
ABCD3P28288 RPS2P4-201ENST00000476944 856 ntBASIC17.91■□□□□ 0.46
ABCD3P28288 REXO2-216ENST00000544196 452 ntTSL 3 BASIC17.91■□□□□ 0.46
ABCD3P28288 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17.91■□□□□ 0.46
ABCD3P28288 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC17.91■□□□□ 0.46
ABCD3P28288 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC17.91■□□□□ 0.46
ABCD3P28288 AC073195.1-201ENST00000607241 877 ntBASIC17.91■□□□□ 0.46
ABCD3P28288 HLA-A-209ENST00000638375 975 ntBASIC17.91■□□□□ 0.46
ABCD3P28288 AL049637.2-201ENST00000641778 930 ntBASIC17.91■□□□□ 0.46
ABCD3P28288 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
ABCD3P28288 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ABCD3P28288 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC17.91■□□□□ 0.46
ABCD3P28288 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ABCD3P28288 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ABCD3P28288 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ABCD3P28288 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ABCD3P28288 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ABCD3P28288 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
ABCD3P28288 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
ABCD3P28288 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
ABCD3P28288 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ABCD3P28288 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ABCD3P28288 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ABCD3P28288 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ABCD3P28288 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
ABCD3P28288 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.9■□□□□ 0.46
ABCD3P28288 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ABCD3P28288 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
ABCD3P28288 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ABCD3P28288 SAPCD2P4-201ENST00000424595 1171 ntBASIC17.9■□□□□ 0.46
ABCD3P28288 KSR1P1-201ENST00000446298 240 ntBASIC17.9■□□□□ 0.46
ABCD3P28288 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ABCD3P28288 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ABCD3P28288 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
ABCD3P28288 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ABCD3P28288 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC17.9■□□□□ 0.46
ABCD3P28288 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ABCD3P28288 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
ABCD3P28288 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC17.9■□□□□ 0.46
ABCD3P28288 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ABCD3P28288 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
ABCD3P28288 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
ABCD3P28288 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC17.89■□□□□ 0.46
ABCD3P28288 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC17.89■□□□□ 0.45
ABCD3P28288 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ABCD3P28288 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ABCD3P28288 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
ABCD3P28288 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC17.89■□□□□ 0.45
ABCD3P28288 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
ABCD3P28288 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC17.89■□□□□ 0.45
ABCD3P28288 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ABCD3P28288 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ABCD3P28288 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ABCD3P28288 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ABCD3P28288 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ABCD3P28288 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC17.89■□□□□ 0.45
ABCD3P28288 AL445675.2-201ENST00000620291 557 ntBASIC17.89■□□□□ 0.45
ABCD3P28288 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.89■□□□□ 0.45
ABCD3P28288 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC17.89■□□□□ 0.45
ABCD3P28288 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ABCD3P28288 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ABCD3P28288 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC17.89■□□□□ 0.45
ABCD3P28288 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
ABCD3P28288 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC17.89■□□□□ 0.45
ABCD3P28288 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ABCD3P28288 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
ABCD3P28288 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ABCD3P28288 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC17.89■□□□□ 0.45
ABCD3P28288 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
ABCD3P28288 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.88■□□□□ 0.45
ABCD3P28288 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ABCD3P28288 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ABCD3P28288 ANKRD18DP-204ENST00000455355 1975 ntBASIC17.88■□□□□ 0.45
ABCD3P28288 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
ABCD3P28288 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms