Protein–RNA interactions for Protein: P26022

PTX3, Pentraxin-related protein PTX3, humanhuman

Predicted RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3P26022 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.63■□□□□ 0.57
PTX3P26022 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.63■□□□□ 0.57
PTX3P26022 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
PTX3P26022 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PTX3P26022 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC18.63■□□□□ 0.57
PTX3P26022 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.63■□□□□ 0.57
PTX3P26022 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
PTX3P26022 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PTX3P26022 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PTX3P26022 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
PTX3P26022 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PTX3P26022 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PTX3P26022 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
PTX3P26022 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
PTX3P26022 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PTX3P26022 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PTX3P26022 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
PTX3P26022 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC18.62■□□□□ 0.57
PTX3P26022 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.62■□□□□ 0.57
PTX3P26022 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PTX3P26022 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.62■□□□□ 0.57
PTX3P26022 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC18.62■□□□□ 0.57
PTX3P26022 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC18.62■□□□□ 0.57
PTX3P26022 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PTX3P26022 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC18.62■□□□□ 0.57
PTX3P26022 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
PTX3P26022 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC18.62■□□□□ 0.57
PTX3P26022 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PTX3P26022 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PTX3P26022 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PTX3P26022 Z82202.1-201ENST00000623446 1880 ntBASIC18.62■□□□□ 0.57
PTX3P26022 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.62■□□□□ 0.57
PTX3P26022 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PTX3P26022 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PTX3P26022 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PTX3P26022 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
PTX3P26022 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PTX3P26022 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PTX3P26022 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
PTX3P26022 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTX3P26022 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTX3P26022 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PTX3P26022 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
PTX3P26022 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC18.61■□□□□ 0.57
PTX3P26022 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
PTX3P26022 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
PTX3P26022 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
PTX3P26022 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PTX3P26022 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PTX3P26022 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PTX3P26022 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC18.61■□□□□ 0.57
PTX3P26022 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PTX3P26022 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PTX3P26022 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTX3P26022 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTX3P26022 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
PTX3P26022 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTX3P26022 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTX3P26022 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PTX3P26022 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PTX3P26022 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
PTX3P26022 AL020996.1-203ENST00000536896 2307 ntBASIC18.6■□□□□ 0.57
PTX3P26022 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
PTX3P26022 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC18.6■□□□□ 0.57
PTX3P26022 ESRRAP1-201ENST00000400596 1257 ntBASIC18.6■□□□□ 0.57
PTX3P26022 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.6■□□□□ 0.57
PTX3P26022 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC18.6■□□□□ 0.57
PTX3P26022 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.6■□□□□ 0.57
PTX3P26022 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PTX3P26022 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PTX3P26022 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.59■□□□□ 0.57
PTX3P26022 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.59■□□□□ 0.57
PTX3P26022 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.59■□□□□ 0.57
PTX3P26022 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
PTX3P26022 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.59■□□□□ 0.57
PTX3P26022 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PTX3P26022 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PTX3P26022 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
PTX3P26022 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PTX3P26022 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
PTX3P26022 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC18.59■□□□□ 0.57
PTX3P26022 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PTX3P26022 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PTX3P26022 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC18.59■□□□□ 0.57
PTX3P26022 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC18.59■□□□□ 0.57
PTX3P26022 MTDHP1-201ENST00000605323 784 ntBASIC18.59■□□□□ 0.57
PTX3P26022 AC069544.1-201ENST00000609399 999 ntBASIC18.59■□□□□ 0.57
PTX3P26022 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PTX3P26022 ZNF815P-204ENST00000434898 1737 ntBASIC18.59■□□□□ 0.57
PTX3P26022 AL032819.2-201ENST00000624543 2162 ntBASIC18.59■□□□□ 0.57
PTX3P26022 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.59■□□□□ 0.57
PTX3P26022 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PTX3P26022 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.59■□□□□ 0.57
PTX3P26022 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
PTX3P26022 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PTX3P26022 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.59■□□□□ 0.57
PTX3P26022 ANKRD18DP-204ENST00000455355 1975 ntBASIC18.59■□□□□ 0.57
PTX3P26022 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
PTX3P26022 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
PTX3P26022 NBPF21P-201ENST00000425093 1451 ntBASIC18.58■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms