Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC19■□□□□ 0.63
CDH3P22223 AC233702.5-201ENST00000584107 538 ntBASIC19■□□□□ 0.63
CDH3P22223 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
CDH3P22223 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19■□□□□ 0.63
CDH3P22223 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19■□□□□ 0.63
CDH3P22223 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CDH3P22223 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CDH3P22223 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
CDH3P22223 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC19■□□□□ 0.63
CDH3P22223 HTR7P1-201ENST00000538670 1336 ntBASIC19■□□□□ 0.63
CDH3P22223 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDH3P22223 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDH3P22223 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.99■□□□□ 0.63
CDH3P22223 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.99■□□□□ 0.63
CDH3P22223 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDH3P22223 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDH3P22223 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDH3P22223 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
CDH3P22223 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CDH3P22223 SNORA78-201ENST00000459373 127 ntBASIC18.99■□□□□ 0.63
CDH3P22223 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC18.99■□□□□ 0.63
CDH3P22223 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
CDH3P22223 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.99■□□□□ 0.63
CDH3P22223 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CDH3P22223 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDH3P22223 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.99■□□□□ 0.63
CDH3P22223 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDH3P22223 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDH3P22223 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.99■□□□□ 0.63
CDH3P22223 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDH3P22223 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDH3P22223 GABARAPL3-202ENST00000624044 1851 ntBASIC18.99■□□□□ 0.63
CDH3P22223 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CDH3P22223 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDH3P22223 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDH3P22223 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CDH3P22223 AL512408.1-201ENST00000569378 2000 ntBASIC18.98■□□□□ 0.63
CDH3P22223 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CDH3P22223 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
CDH3P22223 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDH3P22223 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDH3P22223 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDH3P22223 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDH3P22223 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDH3P22223 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CDH3P22223 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CDH3P22223 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
CDH3P22223 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CDH3P22223 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDH3P22223 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDH3P22223 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC18.98■□□□□ 0.63
CDH3P22223 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC18.98■□□□□ 0.63
CDH3P22223 REXO2-216ENST00000544196 452 ntTSL 3 BASIC18.98■□□□□ 0.63
CDH3P22223 MIR4497-201ENST00000583208 89 ntBASIC18.98■□□□□ 0.63
CDH3P22223 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC18.98■□□□□ 0.63
CDH3P22223 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
CDH3P22223 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDH3P22223 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDH3P22223 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CDH3P22223 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDH3P22223 TFP1-202ENST00000475455 1573 ntBASIC18.98■□□□□ 0.63
CDH3P22223 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.98■□□□□ 0.63
CDH3P22223 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CDH3P22223 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDH3P22223 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
CDH3P22223 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDH3P22223 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.97■□□□□ 0.63
CDH3P22223 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
CDH3P22223 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
CDH3P22223 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CDH3P22223 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDH3P22223 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
CDH3P22223 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
CDH3P22223 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CDH3P22223 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
CDH3P22223 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC18.97■□□□□ 0.63
CDH3P22223 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC18.97■□□□□ 0.63
CDH3P22223 AL049637.2-201ENST00000641778 930 ntBASIC18.97■□□□□ 0.63
CDH3P22223 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDH3P22223 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CDH3P22223 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.97■□□□□ 0.63
CDH3P22223 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.97■□□□□ 0.63
CDH3P22223 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDH3P22223 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC18.97■□□□□ 0.63
CDH3P22223 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
CDH3P22223 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.96■□□□□ 0.63
CDH3P22223 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.96■□□□□ 0.63
CDH3P22223 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDH3P22223 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDH3P22223 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDH3P22223 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDH3P22223 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.96■□□□□ 0.63
CDH3P22223 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CDH3P22223 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDH3P22223 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDH3P22223 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
CDH3P22223 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC18.96■□□□□ 0.63
CDH3P22223 AL353807.1-201ENST00000427475 662 ntBASIC18.96■□□□□ 0.63
CDH3P22223 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.96■□□□□ 0.63
CDH3P22223 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms