Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HMGN1P05114 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HMGN1P05114 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HMGN1P05114 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
HMGN1P05114 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.59■□□□□ 0.41
HMGN1P05114 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HMGN1P05114 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
HMGN1P05114 AC141586.3-201ENST00000562166 1838 ntBASIC17.58■□□□□ 0.41
HMGN1P05114 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
HMGN1P05114 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.41
HMGN1P05114 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
HMGN1P05114 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
HMGN1P05114 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
HMGN1P05114 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HMGN1P05114 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC17.58■□□□□ 0.4
HMGN1P05114 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HMGN1P05114 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
HMGN1P05114 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
HMGN1P05114 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
HMGN1P05114 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC17.58■□□□□ 0.4
HMGN1P05114 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC17.58■□□□□ 0.4
HMGN1P05114 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC17.58■□□□□ 0.4
HMGN1P05114 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
HMGN1P05114 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
HMGN1P05114 CROCCP3-202ENST00000420820 1947 ntBASIC17.58■□□□□ 0.4
HMGN1P05114 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HMGN1P05114 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
HMGN1P05114 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HMGN1P05114 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HMGN1P05114 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HMGN1P05114 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.58■□□□□ 0.4
HMGN1P05114 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC17.57■□□□□ 0.4
HMGN1P05114 AL161938.1-201ENST00000569833 2180 ntBASIC17.57■□□□□ 0.4
HMGN1P05114 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC17.57■□□□□ 0.4
HMGN1P05114 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HMGN1P05114 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
HMGN1P05114 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HMGN1P05114 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HMGN1P05114 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
HMGN1P05114 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
HMGN1P05114 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC17.57■□□□□ 0.4
HMGN1P05114 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
HMGN1P05114 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC17.57■□□□□ 0.4
HMGN1P05114 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HMGN1P05114 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
HMGN1P05114 CALM3-202ENST00000391918 702 ntTSL 2 BASIC17.57■□□□□ 0.4
HMGN1P05114 AL512625.2-201ENST00000417533 625 ntBASIC17.57■□□□□ 0.4
HMGN1P05114 AC007322.1-201ENST00000426983 750 ntBASIC17.57■□□□□ 0.4
HMGN1P05114 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC17.57■□□□□ 0.4
HMGN1P05114 PLD4-205ENST00000553861 667 ntTSL 2 BASIC17.57■□□□□ 0.4
HMGN1P05114 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HMGN1P05114 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC17.57■□□□□ 0.4
HMGN1P05114 MIR6821-201ENST00000617625 74 ntBASIC17.57■□□□□ 0.4
HMGN1P05114 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
HMGN1P05114 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HMGN1P05114 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HMGN1P05114 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HMGN1P05114 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HMGN1P05114 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC17.57■□□□□ 0.4
HMGN1P05114 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
HMGN1P05114 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
HMGN1P05114 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
HMGN1P05114 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
HMGN1P05114 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
HMGN1P05114 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HMGN1P05114 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
HMGN1P05114 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC17.56■□□□□ 0.4
HMGN1P05114 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HMGN1P05114 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
HMGN1P05114 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.56■□□□□ 0.4
HMGN1P05114 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HMGN1P05114 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC17.56■□□□□ 0.4
HMGN1P05114 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
HMGN1P05114 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.56■□□□□ 0.4
HMGN1P05114 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC17.56■□□□□ 0.4
HMGN1P05114 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HMGN1P05114 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.56■□□□□ 0.4
HMGN1P05114 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HMGN1P05114 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC17.56■□□□□ 0.4
HMGN1P05114 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC17.56■□□□□ 0.4
HMGN1P05114 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC17.56■□□□□ 0.4
HMGN1P05114 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HMGN1P05114 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HMGN1P05114 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HMGN1P05114 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HMGN1P05114 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
HMGN1P05114 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.56■□□□□ 0.4
HMGN1P05114 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.56■□□□□ 0.4
HMGN1P05114 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
HMGN1P05114 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HMGN1P05114 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
HMGN1P05114 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HMGN1P05114 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HMGN1P05114 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HMGN1P05114 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
HMGN1P05114 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
HMGN1P05114 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HMGN1P05114 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
HMGN1P05114 APTR-203ENST00000430801 583 ntTSL 5 BASIC17.55■□□□□ 0.4
HMGN1P05114 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms