Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC25.86■■□□□ 1.73
LTN1O94822 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC25.86■■□□□ 1.73
LTN1O94822 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
LTN1O94822 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC25.86■■□□□ 1.73
LTN1O94822 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC25.86■■□□□ 1.73
LTN1O94822 NEK4P2-201ENST00000580004 1012 ntBASIC25.86■■□□□ 1.73
LTN1O94822 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC25.86■■□□□ 1.73
LTN1O94822 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
LTN1O94822 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
LTN1O94822 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC25.86■■□□□ 1.73
LTN1O94822 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
LTN1O94822 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC25.85■■□□□ 1.73
LTN1O94822 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
LTN1O94822 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
LTN1O94822 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC25.85■■□□□ 1.73
LTN1O94822 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC25.85■■□□□ 1.73
LTN1O94822 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC25.85■■□□□ 1.73
LTN1O94822 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC25.85■■□□□ 1.73
LTN1O94822 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC25.85■■□□□ 1.73
LTN1O94822 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
LTN1O94822 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC25.85■■□□□ 1.73
LTN1O94822 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC25.85■■□□□ 1.73
LTN1O94822 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC25.85■■□□□ 1.73
LTN1O94822 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC25.85■■□□□ 1.73
LTN1O94822 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
LTN1O94822 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
LTN1O94822 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
LTN1O94822 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
LTN1O94822 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
LTN1O94822 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC25.84■■□□□ 1.73
LTN1O94822 HCG4P8-203ENST00000443049 980 ntBASIC25.84■■□□□ 1.73
LTN1O94822 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC25.84■■□□□ 1.73
LTN1O94822 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
LTN1O94822 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC25.84■■□□□ 1.73
LTN1O94822 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC25.84■■□□□ 1.73
LTN1O94822 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC25.84■■□□□ 1.73
LTN1O94822 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC25.84■■□□□ 1.73
LTN1O94822 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC25.84■■□□□ 1.73
LTN1O94822 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC25.84■■□□□ 1.73
LTN1O94822 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
LTN1O94822 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
LTN1O94822 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC25.84■■□□□ 1.73
LTN1O94822 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC25.84■■□□□ 1.73
LTN1O94822 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC25.84■■□□□ 1.73
LTN1O94822 VENTXP5-201ENST00000523979 775 ntBASIC25.84■■□□□ 1.73
LTN1O94822 WDR88-203ENST00000592765 651 ntTSL 5 BASIC25.84■■□□□ 1.73
LTN1O94822 AL121894.2-201ENST00000602977 491 ntBASIC25.84■■□□□ 1.73
LTN1O94822 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC25.84■■□□□ 1.73
LTN1O94822 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC25.84■■□□□ 1.73
LTN1O94822 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC25.84■■□□□ 1.73
LTN1O94822 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
LTN1O94822 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC25.84■■□□□ 1.73
LTN1O94822 AC009237.14-201ENST00000609975 1594 ntBASIC25.84■■□□□ 1.73
LTN1O94822 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
LTN1O94822 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC25.83■■□□□ 1.73
LTN1O94822 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC25.83■■□□□ 1.73
LTN1O94822 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC25.83■■□□□ 1.73
LTN1O94822 Telomerase-vert.1-201ENST00000363312 438 ntBASIC25.83■■□□□ 1.73
LTN1O94822 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
LTN1O94822 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC25.83■■□□□ 1.73
LTN1O94822 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
LTN1O94822 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
LTN1O94822 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC25.83■■□□□ 1.73
LTN1O94822 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC25.83■■□□□ 1.73
LTN1O94822 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC25.83■■□□□ 1.73
LTN1O94822 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC25.83■■□□□ 1.73
LTN1O94822 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC25.82■■□□□ 1.72
LTN1O94822 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC25.82■■□□□ 1.72
LTN1O94822 IER3-202ENST00000376377 1350 ntBASIC25.82■■□□□ 1.72
LTN1O94822 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
LTN1O94822 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
LTN1O94822 DAP-202ENST00000432074 1048 ntTSL 2 BASIC25.82■■□□□ 1.72
LTN1O94822 KRT18P56-201ENST00000507275 550 ntBASIC25.82■■□□□ 1.72
LTN1O94822 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
LTN1O94822 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
LTN1O94822 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
LTN1O94822 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC25.82■■□□□ 1.72
LTN1O94822 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC25.82■■□□□ 1.72
LTN1O94822 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC25.82■■□□□ 1.72
LTN1O94822 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC25.82■■□□□ 1.72
LTN1O94822 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
LTN1O94822 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
LTN1O94822 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC25.81■■□□□ 1.72
LTN1O94822 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC25.81■■□□□ 1.72
LTN1O94822 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC25.81■■□□□ 1.72
LTN1O94822 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC25.81■■□□□ 1.72
LTN1O94822 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC25.81■■□□□ 1.72
LTN1O94822 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
LTN1O94822 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
LTN1O94822 STARP1-201ENST00000397973 869 ntBASIC25.81■■□□□ 1.72
LTN1O94822 KRT18P48-201ENST00000434763 852 ntBASIC25.81■■□□□ 1.72
LTN1O94822 SPDYE13P-201ENST00000445314 798 ntBASIC25.81■■□□□ 1.72
LTN1O94822 HOMER2P1-201ENST00000455653 964 ntBASIC25.81■■□□□ 1.72
LTN1O94822 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC25.81■■□□□ 1.72
LTN1O94822 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
LTN1O94822 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC25.81■■□□□ 1.72
LTN1O94822 AC036111.1-201ENST00000533973 1582 ntBASIC25.81■■□□□ 1.72
LTN1O94822 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC25.81■■□□□ 1.72
LTN1O94822 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC25.81■■□□□ 1.72
LTN1O94822 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC25.81■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms