Protein–RNA interactions for Protein: O75486

SUPT3H, Transcription initiation protein SPT3 homolog, humanhuman

Predictions only

Length 399 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT3HO75486 AC098818.2-201ENST00000564925 2320 ntBASIC19.22■□□□□ 0.67
SUPT3HO75486 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SUPT3HO75486 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SUPT3HO75486 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SUPT3HO75486 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC19.22■□□□□ 0.67
SUPT3HO75486 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC19.22■□□□□ 0.67
SUPT3HO75486 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SUPT3HO75486 AC091874.3-201ENST00000512672 1195 ntBASIC19.22■□□□□ 0.67
SUPT3HO75486 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
SUPT3HO75486 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC19.22■□□□□ 0.67
SUPT3HO75486 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC19.22■□□□□ 0.67
SUPT3HO75486 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
SUPT3HO75486 AC006557.6-201ENST00000623071 864 ntBASIC19.22■□□□□ 0.67
SUPT3HO75486 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SUPT3HO75486 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SUPT3HO75486 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SUPT3HO75486 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SUPT3HO75486 AP000974.1-201ENST00000623909 2387 ntBASIC19.22■□□□□ 0.67
SUPT3HO75486 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
SUPT3HO75486 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC19.22■□□□□ 0.67
SUPT3HO75486 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SUPT3HO75486 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SUPT3HO75486 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC19.22■□□□□ 0.67
SUPT3HO75486 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.22■□□□□ 0.67
SUPT3HO75486 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SUPT3HO75486 AL032819.2-201ENST00000624543 2162 ntBASIC19.22■□□□□ 0.67
SUPT3HO75486 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SUPT3HO75486 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.21■□□□□ 0.67
SUPT3HO75486 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SUPT3HO75486 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
SUPT3HO75486 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SUPT3HO75486 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
SUPT3HO75486 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SUPT3HO75486 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SUPT3HO75486 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
SUPT3HO75486 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
SUPT3HO75486 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC19.21■□□□□ 0.67
SUPT3HO75486 BET1L-207ENST00000529614 560 ntTSL 5 BASIC19.21■□□□□ 0.67
SUPT3HO75486 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC19.21■□□□□ 0.67
SUPT3HO75486 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC19.21■□□□□ 0.67
SUPT3HO75486 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SUPT3HO75486 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
SUPT3HO75486 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SUPT3HO75486 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SUPT3HO75486 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SUPT3HO75486 BX323043.1-201ENST00000641006 1765 ntBASIC19.21■□□□□ 0.67
SUPT3HO75486 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
SUPT3HO75486 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
SUPT3HO75486 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
SUPT3HO75486 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.2■□□□□ 0.66
SUPT3HO75486 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
SUPT3HO75486 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SUPT3HO75486 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SUPT3HO75486 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.2■□□□□ 0.66
SUPT3HO75486 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SUPT3HO75486 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SUPT3HO75486 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SUPT3HO75486 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SUPT3HO75486 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
SUPT3HO75486 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC19.2■□□□□ 0.66
SUPT3HO75486 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SUPT3HO75486 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SUPT3HO75486 AC073210.2-201ENST00000430369 194 ntBASIC19.2■□□□□ 0.66
SUPT3HO75486 GUSBP6-202ENST00000438529 1198 ntBASIC19.2■□□□□ 0.66
SUPT3HO75486 TSPY6P-201ENST00000448518 926 ntBASIC19.2■□□□□ 0.66
SUPT3HO75486 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC19.2■□□□□ 0.66
SUPT3HO75486 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
SUPT3HO75486 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
SUPT3HO75486 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SUPT3HO75486 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.2■□□□□ 0.66
SUPT3HO75486 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SUPT3HO75486 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SUPT3HO75486 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SUPT3HO75486 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SUPT3HO75486 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SUPT3HO75486 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.2■□□□□ 0.66
SUPT3HO75486 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SUPT3HO75486 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SUPT3HO75486 TFP1-202ENST00000475455 1573 ntBASIC19.19■□□□□ 0.66
SUPT3HO75486 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SUPT3HO75486 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SUPT3HO75486 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SUPT3HO75486 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SUPT3HO75486 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SUPT3HO75486 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
SUPT3HO75486 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
SUPT3HO75486 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.19■□□□□ 0.66
SUPT3HO75486 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC19.19■□□□□ 0.66
SUPT3HO75486 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC19.19■□□□□ 0.66
SUPT3HO75486 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC19.19■□□□□ 0.66
SUPT3HO75486 NCF1B-203ENST00000435988 1254 ntBASIC19.19■□□□□ 0.66
SUPT3HO75486 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC19.19■□□□□ 0.66
SUPT3HO75486 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SUPT3HO75486 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SUPT3HO75486 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.19■□□□□ 0.66
SUPT3HO75486 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SUPT3HO75486 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SUPT3HO75486 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
SUPT3HO75486 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
SUPT3HO75486 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms