Protein–RNA interactions for Protein: O60287

URB1, Nucleolar pre-ribosomal-associated protein 1, humanhuman

Known RBP Predictions only

Length 2,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
URB1O60287 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
URB1O60287 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
URB1O60287 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
URB1O60287 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.36■□□□□ 0.53
URB1O60287 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
URB1O60287 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.36■□□□□ 0.53
URB1O60287 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
URB1O60287 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
URB1O60287 HLA-G-202ENST00000376815 851 ntBASIC18.35■□□□□ 0.53
URB1O60287 HLA-G-203ENST00000376818 1127 ntBASIC18.35■□□□□ 0.53
URB1O60287 KRT18P38-201ENST00000449496 1282 ntBASIC18.35■□□□□ 0.53
URB1O60287 MIR3180-1-201ENST00000580374 94 ntBASIC18.35■□□□□ 0.53
URB1O60287 MIR3180-3-201ENST00000584616 94 ntBASIC18.35■□□□□ 0.53
URB1O60287 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC18.35■□□□□ 0.53
URB1O60287 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
URB1O60287 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
URB1O60287 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
URB1O60287 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC18.35■□□□□ 0.53
URB1O60287 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
URB1O60287 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
URB1O60287 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
URB1O60287 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC18.35■□□□□ 0.53
URB1O60287 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
URB1O60287 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
URB1O60287 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC18.35■□□□□ 0.53
URB1O60287 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
URB1O60287 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
URB1O60287 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
URB1O60287 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC18.34■□□□□ 0.53
URB1O60287 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
URB1O60287 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
URB1O60287 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
URB1O60287 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
URB1O60287 AC004870.1-201ENST00000315132 882 ntBASIC18.34■□□□□ 0.53
URB1O60287 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC18.34■□□□□ 0.53
URB1O60287 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC18.34■□□□□ 0.53
URB1O60287 NPAP1P7-201ENST00000613027 823 ntBASIC18.34■□□□□ 0.53
URB1O60287 KRT8P20-201ENST00000423953 1409 ntBASIC18.34■□□□□ 0.53
URB1O60287 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.34■□□□□ 0.53
URB1O60287 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
URB1O60287 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
URB1O60287 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
URB1O60287 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
URB1O60287 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
URB1O60287 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
URB1O60287 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
URB1O60287 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
URB1O60287 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
URB1O60287 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC18.34■□□□□ 0.53
URB1O60287 AC009078.2-202ENST00000463353 338 ntBASIC18.34■□□□□ 0.53
URB1O60287 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC18.34■□□□□ 0.53
URB1O60287 LY6E-213ENST00000522528 606 ntTSL 3 BASIC18.34■□□□□ 0.53
URB1O60287 AL353719.1-201ENST00000566847 864 ntBASIC18.34■□□□□ 0.53
URB1O60287 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
URB1O60287 IFNL4P1-201ENST00000607083 540 ntBASIC18.34■□□□□ 0.53
URB1O60287 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
URB1O60287 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
URB1O60287 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC18.33■□□□□ 0.53
URB1O60287 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.33■□□□□ 0.53
URB1O60287 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.33■□□□□ 0.53
URB1O60287 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.33■□□□□ 0.53
URB1O60287 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
URB1O60287 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC18.33■□□□□ 0.53
URB1O60287 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC18.33■□□□□ 0.53
URB1O60287 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC18.33■□□□□ 0.53
URB1O60287 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
URB1O60287 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
URB1O60287 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
URB1O60287 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
URB1O60287 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
URB1O60287 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
URB1O60287 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
URB1O60287 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
URB1O60287 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
URB1O60287 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
URB1O60287 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
URB1O60287 GOLGA6L3-201ENST00000507199 1679 ntBASIC18.33■□□□□ 0.52
URB1O60287 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.33■□□□□ 0.52
URB1O60287 SKP2-204ENST00000508514 821 ntTSL 3 BASIC18.33■□□□□ 0.52
URB1O60287 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC18.33■□□□□ 0.52
URB1O60287 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC18.33■□□□□ 0.52
URB1O60287 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
URB1O60287 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC18.32■□□□□ 0.52
URB1O60287 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
URB1O60287 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
URB1O60287 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
URB1O60287 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
URB1O60287 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
URB1O60287 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
URB1O60287 Z98882.1-201ENST00000622160 2253 ntBASIC18.32■□□□□ 0.52
URB1O60287 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
URB1O60287 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
URB1O60287 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
URB1O60287 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC18.32■□□□□ 0.52
URB1O60287 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC18.32■□□□□ 0.52
URB1O60287 CNP-204ENST00000472031 1019 ntTSL 2 BASIC18.32■□□□□ 0.52
URB1O60287 ZNF444P1-201ENST00000559497 298 ntBASIC18.32■□□□□ 0.52
URB1O60287 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
URB1O60287 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
URB1O60287 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms