Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.46■□□□□ 0.55
PDLIM1O00151 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PDLIM1O00151 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PDLIM1O00151 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PDLIM1O00151 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
PDLIM1O00151 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PDLIM1O00151 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PDLIM1O00151 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
PDLIM1O00151 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.54
PDLIM1O00151 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.45■□□□□ 0.54
PDLIM1O00151 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.45■□□□□ 0.54
PDLIM1O00151 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PDLIM1O00151 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
PDLIM1O00151 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PDLIM1O00151 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.45■□□□□ 0.54
PDLIM1O00151 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PDLIM1O00151 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
PDLIM1O00151 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC18.45■□□□□ 0.54
PDLIM1O00151 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC18.45■□□□□ 0.54
PDLIM1O00151 CDCA4P2-201ENST00000441182 718 ntBASIC18.45■□□□□ 0.54
PDLIM1O00151 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC18.45■□□□□ 0.54
PDLIM1O00151 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC18.45■□□□□ 0.54
PDLIM1O00151 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
PDLIM1O00151 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PDLIM1O00151 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PDLIM1O00151 AC073111.5-205ENST00000641717 521 ntBASIC18.45■□□□□ 0.54
PDLIM1O00151 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.45■□□□□ 0.54
PDLIM1O00151 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PDLIM1O00151 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PDLIM1O00151 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
PDLIM1O00151 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
PDLIM1O00151 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC18.45■□□□□ 0.54
PDLIM1O00151 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC18.45■□□□□ 0.54
PDLIM1O00151 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
PDLIM1O00151 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PDLIM1O00151 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.45■□□□□ 0.54
PDLIM1O00151 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PDLIM1O00151 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PDLIM1O00151 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.44■□□□□ 0.54
PDLIM1O00151 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PDLIM1O00151 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.44■□□□□ 0.54
PDLIM1O00151 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PDLIM1O00151 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.44■□□□□ 0.54
PDLIM1O00151 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.44■□□□□ 0.54
PDLIM1O00151 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PDLIM1O00151 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
PDLIM1O00151 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC18.44■□□□□ 0.54
PDLIM1O00151 METTL26-203ENST00000397664 604 ntTSL 2 BASIC18.44■□□□□ 0.54
PDLIM1O00151 DUX4L16-201ENST00000555130 1264 ntBASIC18.44■□□□□ 0.54
PDLIM1O00151 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC18.44■□□□□ 0.54
PDLIM1O00151 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
PDLIM1O00151 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
PDLIM1O00151 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PDLIM1O00151 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PDLIM1O00151 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.44■□□□□ 0.54
PDLIM1O00151 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PDLIM1O00151 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
PDLIM1O00151 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.44■□□□□ 0.54
PDLIM1O00151 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.44■□□□□ 0.54
PDLIM1O00151 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PDLIM1O00151 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PDLIM1O00151 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
PDLIM1O00151 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
PDLIM1O00151 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
PDLIM1O00151 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PDLIM1O00151 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PDLIM1O00151 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
PDLIM1O00151 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PDLIM1O00151 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC18.43■□□□□ 0.54
PDLIM1O00151 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PDLIM1O00151 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PDLIM1O00151 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
PDLIM1O00151 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
PDLIM1O00151 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PDLIM1O00151 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.43■□□□□ 0.54
PDLIM1O00151 UQCRFS1P1-201ENST00000435169 820 ntBASIC18.43■□□□□ 0.54
PDLIM1O00151 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC18.43■□□□□ 0.54
PDLIM1O00151 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC18.43■□□□□ 0.54
PDLIM1O00151 AC010536.3-201ENST00000620306 533 ntBASIC18.43■□□□□ 0.54
PDLIM1O00151 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
PDLIM1O00151 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PDLIM1O00151 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
PDLIM1O00151 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PDLIM1O00151 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
PDLIM1O00151 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PDLIM1O00151 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.42■□□□□ 0.54
PDLIM1O00151 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
PDLIM1O00151 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
PDLIM1O00151 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PDLIM1O00151 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC18.42■□□□□ 0.54
PDLIM1O00151 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.42■□□□□ 0.54
PDLIM1O00151 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PDLIM1O00151 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PDLIM1O00151 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
PDLIM1O00151 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PDLIM1O00151 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
PDLIM1O00151 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
PDLIM1O00151 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
PDLIM1O00151 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PDLIM1O00151 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms