Protein–RNA interactions for Protein: A6NLX3

SPDYE4, Speedy protein E4, humanhuman

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE4A6NLX3 AC020763.4-201ENST00000623414 4170 ntBASIC21.8■■□□□ 1.08
SPDYE4A6NLX3 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SPDYE4A6NLX3 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC21.8■■□□□ 1.08
SPDYE4A6NLX3 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC21.8■■□□□ 1.08
SPDYE4A6NLX3 PARN-205ENST00000539279 1557 ntTSL 2 BASIC21.8■■□□□ 1.08
SPDYE4A6NLX3 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SPDYE4A6NLX3 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SPDYE4A6NLX3 AC092473.1-201ENST00000441098 221 ntBASIC21.8■■□□□ 1.08
SPDYE4A6NLX3 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SPDYE4A6NLX3 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC21.8■■□□□ 1.08
SPDYE4A6NLX3 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
SPDYE4A6NLX3 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
SPDYE4A6NLX3 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SPDYE4A6NLX3 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
SPDYE4A6NLX3 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SPDYE4A6NLX3 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
SPDYE4A6NLX3 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
SPDYE4A6NLX3 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC21.8■■□□□ 1.08
SPDYE4A6NLX3 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SPDYE4A6NLX3 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC21.79■■□□□ 1.08
SPDYE4A6NLX3 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC21.79■■□□□ 1.08
SPDYE4A6NLX3 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SPDYE4A6NLX3 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
SPDYE4A6NLX3 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC21.79■■□□□ 1.08
SPDYE4A6NLX3 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SPDYE4A6NLX3 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SPDYE4A6NLX3 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SPDYE4A6NLX3 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC21.79■■□□□ 1.08
SPDYE4A6NLX3 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
SPDYE4A6NLX3 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC21.79■■□□□ 1.08
SPDYE4A6NLX3 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
SPDYE4A6NLX3 NARF-205ENST00000412079 1760 ntTSL 5 BASIC21.79■■□□□ 1.08
SPDYE4A6NLX3 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
SPDYE4A6NLX3 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
SPDYE4A6NLX3 AC125437.2-201ENST00000625180 2167 ntBASIC21.78■■□□□ 1.08
SPDYE4A6NLX3 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SPDYE4A6NLX3 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC21.78■■□□□ 1.08
SPDYE4A6NLX3 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC21.78■■□□□ 1.08
SPDYE4A6NLX3 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC21.78■■□□□ 1.08
SPDYE4A6NLX3 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC21.78■■□□□ 1.08
SPDYE4A6NLX3 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SPDYE4A6NLX3 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
SPDYE4A6NLX3 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
SPDYE4A6NLX3 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SPDYE4A6NLX3 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
SPDYE4A6NLX3 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SPDYE4A6NLX3 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SPDYE4A6NLX3 SAPCD2P1-201ENST00000395413 1184 ntBASIC21.78■■□□□ 1.08
SPDYE4A6NLX3 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC21.78■■□□□ 1.08
SPDYE4A6NLX3 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC21.78■■□□□ 1.08
SPDYE4A6NLX3 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC21.78■■□□□ 1.08
SPDYE4A6NLX3 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC21.78■■□□□ 1.08
SPDYE4A6NLX3 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC21.78■■□□□ 1.08
SPDYE4A6NLX3 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SPDYE4A6NLX3 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SPDYE4A6NLX3 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC21.78■■□□□ 1.08
SPDYE4A6NLX3 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SPDYE4A6NLX3 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
SPDYE4A6NLX3 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC21.78■■□□□ 1.08
SPDYE4A6NLX3 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SPDYE4A6NLX3 STX5-203ENST00000394690 1568 ntTSL 5 BASIC21.78■■□□□ 1.08
SPDYE4A6NLX3 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC21.78■■□□□ 1.08
SPDYE4A6NLX3 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC21.78■■□□□ 1.08
SPDYE4A6NLX3 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SPDYE4A6NLX3 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC21.77■■□□□ 1.08
SPDYE4A6NLX3 PALM-207ENST00000590161 2137 ntTSL 4 BASIC21.77■■□□□ 1.08
SPDYE4A6NLX3 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
SPDYE4A6NLX3 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SPDYE4A6NLX3 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC21.77■■□□□ 1.08
SPDYE4A6NLX3 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC21.77■■□□□ 1.08
SPDYE4A6NLX3 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
SPDYE4A6NLX3 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SPDYE4A6NLX3 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
SPDYE4A6NLX3 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC21.77■■□□□ 1.08
SPDYE4A6NLX3 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC21.77■■□□□ 1.08
SPDYE4A6NLX3 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC21.77■■□□□ 1.08
SPDYE4A6NLX3 AC069544.1-201ENST00000609399 999 ntBASIC21.77■■□□□ 1.08
SPDYE4A6NLX3 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC21.77■■□□□ 1.08
SPDYE4A6NLX3 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC21.77■■□□□ 1.08
SPDYE4A6NLX3 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SPDYE4A6NLX3 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC21.77■■□□□ 1.08
SPDYE4A6NLX3 AL133373.2-201ENST00000623187 2828 ntBASIC21.77■■□□□ 1.08
SPDYE4A6NLX3 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
SPDYE4A6NLX3 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SPDYE4A6NLX3 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC21.76■■□□□ 1.07
SPDYE4A6NLX3 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SPDYE4A6NLX3 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SPDYE4A6NLX3 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
SPDYE4A6NLX3 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SPDYE4A6NLX3 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SPDYE4A6NLX3 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
SPDYE4A6NLX3 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC21.76■■□□□ 1.07
SPDYE4A6NLX3 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SPDYE4A6NLX3 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SPDYE4A6NLX3 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SPDYE4A6NLX3 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC21.76■■□□□ 1.07
SPDYE4A6NLX3 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SPDYE4A6NLX3 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC21.76■■□□□ 1.07
SPDYE4A6NLX3 RN7SL471P-201ENST00000580476 299 ntBASIC21.76■■□□□ 1.07
SPDYE4A6NLX3 MIR4497-201ENST00000583208 89 ntBASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms