Protein–RNA interactions for Protein: A6NH52

TVP23A, Golgi apparatus membrane protein TVP23 homolog A, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23AA6NH52 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TVP23AA6NH52 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC17.33■□□□□ 0.37
TVP23AA6NH52 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
TVP23AA6NH52 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC17.33■□□□□ 0.37
TVP23AA6NH52 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC17.33■□□□□ 0.37
TVP23AA6NH52 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
TVP23AA6NH52 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
TVP23AA6NH52 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TVP23AA6NH52 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TVP23AA6NH52 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TVP23AA6NH52 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TVP23AA6NH52 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
TVP23AA6NH52 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC17.33■□□□□ 0.36
TVP23AA6NH52 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC17.33■□□□□ 0.36
TVP23AA6NH52 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC17.33■□□□□ 0.36
TVP23AA6NH52 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
TVP23AA6NH52 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TVP23AA6NH52 AC005829.2-201ENST00000571422 1056 ntBASIC17.33■□□□□ 0.36
TVP23AA6NH52 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
TVP23AA6NH52 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
TVP23AA6NH52 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC17.33■□□□□ 0.36
TVP23AA6NH52 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TVP23AA6NH52 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TVP23AA6NH52 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TVP23AA6NH52 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
TVP23AA6NH52 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
TVP23AA6NH52 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC17.33■□□□□ 0.36
TVP23AA6NH52 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TVP23AA6NH52 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TVP23AA6NH52 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.33■□□□□ 0.36
TVP23AA6NH52 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TVP23AA6NH52 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
TVP23AA6NH52 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TVP23AA6NH52 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.32■□□□□ 0.36
TVP23AA6NH52 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
TVP23AA6NH52 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
TVP23AA6NH52 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TVP23AA6NH52 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TVP23AA6NH52 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
TVP23AA6NH52 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TVP23AA6NH52 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TVP23AA6NH52 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TVP23AA6NH52 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TVP23AA6NH52 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TVP23AA6NH52 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TVP23AA6NH52 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
TVP23AA6NH52 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TVP23AA6NH52 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
TVP23AA6NH52 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TVP23AA6NH52 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TVP23AA6NH52 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
TVP23AA6NH52 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC17.32■□□□□ 0.36
TVP23AA6NH52 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TVP23AA6NH52 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC17.32■□□□□ 0.36
TVP23AA6NH52 RER1-204ENST00000378518 522 ntTSL 3 BASIC17.32■□□□□ 0.36
TVP23AA6NH52 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TVP23AA6NH52 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC17.32■□□□□ 0.36
TVP23AA6NH52 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
TVP23AA6NH52 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
TVP23AA6NH52 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC17.32■□□□□ 0.36
TVP23AA6NH52 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
TVP23AA6NH52 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.32■□□□□ 0.36
TVP23AA6NH52 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TVP23AA6NH52 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TVP23AA6NH52 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC17.32■□□□□ 0.36
TVP23AA6NH52 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
TVP23AA6NH52 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC17.32■□□□□ 0.36
TVP23AA6NH52 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TVP23AA6NH52 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TVP23AA6NH52 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
TVP23AA6NH52 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TVP23AA6NH52 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TVP23AA6NH52 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TVP23AA6NH52 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC17.31■□□□□ 0.36
TVP23AA6NH52 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
TVP23AA6NH52 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TVP23AA6NH52 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TVP23AA6NH52 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
TVP23AA6NH52 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC17.31■□□□□ 0.36
TVP23AA6NH52 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TVP23AA6NH52 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TVP23AA6NH52 GGT1-206ENST00000404223 952 ntTSL 2 BASIC17.31■□□□□ 0.36
TVP23AA6NH52 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TVP23AA6NH52 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC17.31■□□□□ 0.36
TVP23AA6NH52 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC17.31■□□□□ 0.36
TVP23AA6NH52 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC17.31■□□□□ 0.36
TVP23AA6NH52 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC17.31■□□□□ 0.36
TVP23AA6NH52 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TVP23AA6NH52 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TVP23AA6NH52 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.31■□□□□ 0.36
TVP23AA6NH52 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TVP23AA6NH52 LINC01465-201ENST00000408887 1940 ntBASIC17.31■□□□□ 0.36
TVP23AA6NH52 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
TVP23AA6NH52 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TVP23AA6NH52 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
TVP23AA6NH52 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TVP23AA6NH52 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TVP23AA6NH52 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TVP23AA6NH52 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TVP23AA6NH52 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms