Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
CCDC66A2RUB6 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC66A2RUB6 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC66A2RUB6 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC66A2RUB6 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
CCDC66A2RUB6 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC66A2RUB6 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC66A2RUB6 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.97■□□□□ 0.95
CCDC66A2RUB6 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC66A2RUB6 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.96■□□□□ 0.95
CCDC66A2RUB6 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC66A2RUB6 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC66A2RUB6 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC66A2RUB6 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC66A2RUB6 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC66A2RUB6 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
CCDC66A2RUB6 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC20.96■□□□□ 0.95
CCDC66A2RUB6 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC20.96■□□□□ 0.95
CCDC66A2RUB6 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC20.96■□□□□ 0.95
CCDC66A2RUB6 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC20.96■□□□□ 0.95
CCDC66A2RUB6 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC66A2RUB6 STX7-201ENST00000367937 1090 ntTSL 5 BASIC20.96■□□□□ 0.95
CCDC66A2RUB6 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC20.96■□□□□ 0.95
CCDC66A2RUB6 AC100791.3-201ENST00000617619 330 ntBASIC20.96■□□□□ 0.95
CCDC66A2RUB6 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC66A2RUB6 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC66A2RUB6 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC20.96■□□□□ 0.95
CCDC66A2RUB6 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC20.96■□□□□ 0.95
CCDC66A2RUB6 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC66A2RUB6 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC66A2RUB6 PTBP1P-201ENST00000554374 1601 ntBASIC20.96■□□□□ 0.95
CCDC66A2RUB6 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC66A2RUB6 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC66A2RUB6 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC66A2RUB6 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC20.95■□□□□ 0.94
CCDC66A2RUB6 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC66A2RUB6 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC66A2RUB6 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC66A2RUB6 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC66A2RUB6 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC66A2RUB6 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC66A2RUB6 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC66A2RUB6 SPI1-203ENST00000533030 661 ntTSL 2 BASIC20.95■□□□□ 0.94
CCDC66A2RUB6 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.95■□□□□ 0.94
CCDC66A2RUB6 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC20.95■□□□□ 0.94
CCDC66A2RUB6 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC20.95■□□□□ 0.94
CCDC66A2RUB6 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.95■□□□□ 0.94
CCDC66A2RUB6 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC20.95■□□□□ 0.94
CCDC66A2RUB6 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC66A2RUB6 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC66A2RUB6 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC66A2RUB6 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC20.94■□□□□ 0.94
CCDC66A2RUB6 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC66A2RUB6 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
CCDC66A2RUB6 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.94■□□□□ 0.94
CCDC66A2RUB6 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC66A2RUB6 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC66A2RUB6 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
CCDC66A2RUB6 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
CCDC66A2RUB6 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.94■□□□□ 0.94
CCDC66A2RUB6 MIR5787-201ENST00000611784 55 ntBASIC20.94■□□□□ 0.94
CCDC66A2RUB6 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC66A2RUB6 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC66A2RUB6 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC66A2RUB6 TREX1-205ENST00000625293 1783 ntBASIC20.94■□□□□ 0.94
CCDC66A2RUB6 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC66A2RUB6 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC66A2RUB6 GAS2L1P2-201ENST00000436355 1356 ntBASIC20.94■□□□□ 0.94
CCDC66A2RUB6 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
CCDC66A2RUB6 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC66A2RUB6 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC66A2RUB6 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
CCDC66A2RUB6 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC66A2RUB6 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC66A2RUB6 POLI-202ENST00000406285 2030 ntTSL 2 BASIC20.94■□□□□ 0.94
CCDC66A2RUB6 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC66A2RUB6 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC66A2RUB6 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.93■□□□□ 0.94
CCDC66A2RUB6 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC66A2RUB6 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC66A2RUB6 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
CCDC66A2RUB6 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC66A2RUB6 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC66A2RUB6 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC66A2RUB6 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC66A2RUB6 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC66A2RUB6 MCRIP2P1-201ENST00000394346 511 ntBASIC20.93■□□□□ 0.94
CCDC66A2RUB6 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC20.93■□□□□ 0.94
CCDC66A2RUB6 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC20.93■□□□□ 0.94
CCDC66A2RUB6 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
CCDC66A2RUB6 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC66A2RUB6 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.93■□□□□ 0.94
CCDC66A2RUB6 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC20.93■□□□□ 0.94
CCDC66A2RUB6 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
CCDC66A2RUB6 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC66A2RUB6 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC66A2RUB6 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
CCDC66A2RUB6 KRT8P17-201ENST00000453110 1448 ntBASIC20.93■□□□□ 0.94
CCDC66A2RUB6 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC66A2RUB6 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms