Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 NEFHP1-201ENST00000412845 2629 ntBASIC19.75■□□□□ 0.75
TCRBV7S3A2A0A539 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TCRBV7S3A2A0A539 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TCRBV7S3A2A0A539 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TCRBV7S3A2A0A539 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.75■□□□□ 0.75
TCRBV7S3A2A0A539 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
TCRBV7S3A2A0A539 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC19.75■□□□□ 0.75
TCRBV7S3A2A0A539 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TCRBV7S3A2A0A539 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC19.75■□□□□ 0.75
TCRBV7S3A2A0A539 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
TCRBV7S3A2A0A539 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC19.75■□□□□ 0.75
TCRBV7S3A2A0A539 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC19.75■□□□□ 0.75
TCRBV7S3A2A0A539 MIR4758-201ENST00000577688 71 ntBASIC19.75■□□□□ 0.75
TCRBV7S3A2A0A539 HLA-B-256ENST00000639848 1089 ntBASIC19.75■□□□□ 0.75
TCRBV7S3A2A0A539 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TCRBV7S3A2A0A539 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.75■□□□□ 0.75
TCRBV7S3A2A0A539 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
TCRBV7S3A2A0A539 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
TCRBV7S3A2A0A539 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
TCRBV7S3A2A0A539 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TCRBV7S3A2A0A539 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
TCRBV7S3A2A0A539 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TCRBV7S3A2A0A539 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
TCRBV7S3A2A0A539 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TCRBV7S3A2A0A539 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TCRBV7S3A2A0A539 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC19.75■□□□□ 0.75
TCRBV7S3A2A0A539 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TCRBV7S3A2A0A539 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC19.74■□□□□ 0.75
TCRBV7S3A2A0A539 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TCRBV7S3A2A0A539 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TCRBV7S3A2A0A539 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TCRBV7S3A2A0A539 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TCRBV7S3A2A0A539 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
TCRBV7S3A2A0A539 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TCRBV7S3A2A0A539 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TCRBV7S3A2A0A539 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
TCRBV7S3A2A0A539 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TCRBV7S3A2A0A539 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TCRBV7S3A2A0A539 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC19.74■□□□□ 0.75
TCRBV7S3A2A0A539 AC097658.1-201ENST00000475555 843 ntBASIC19.74■□□□□ 0.75
TCRBV7S3A2A0A539 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC19.74■□□□□ 0.75
TCRBV7S3A2A0A539 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC19.74■□□□□ 0.75
TCRBV7S3A2A0A539 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TCRBV7S3A2A0A539 PNMA6B-201ENST00000538162 1200 ntBASIC19.74■□□□□ 0.75
TCRBV7S3A2A0A539 REXO2-208ENST00000539754 791 ntTSL 2 BASIC19.74■□□□□ 0.75
TCRBV7S3A2A0A539 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.74■□□□□ 0.75
TCRBV7S3A2A0A539 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC19.74■□□□□ 0.75
TCRBV7S3A2A0A539 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC19.74■□□□□ 0.75
TCRBV7S3A2A0A539 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC19.74■□□□□ 0.75
TCRBV7S3A2A0A539 GXYLT1P5-201ENST00000614548 1189 ntBASIC19.74■□□□□ 0.75
TCRBV7S3A2A0A539 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TCRBV7S3A2A0A539 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.74■□□□□ 0.75
TCRBV7S3A2A0A539 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TCRBV7S3A2A0A539 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
TCRBV7S3A2A0A539 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TCRBV7S3A2A0A539 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
TCRBV7S3A2A0A539 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TCRBV7S3A2A0A539 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TCRBV7S3A2A0A539 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC19.73■□□□□ 0.75
TCRBV7S3A2A0A539 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TCRBV7S3A2A0A539 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TCRBV7S3A2A0A539 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
TCRBV7S3A2A0A539 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TCRBV7S3A2A0A539 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC19.73■□□□□ 0.75
TCRBV7S3A2A0A539 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TCRBV7S3A2A0A539 KLF2-202ENST00000592003 564 ntTSL 3 BASIC19.73■□□□□ 0.75
TCRBV7S3A2A0A539 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TCRBV7S3A2A0A539 AC120498.9-201ENST00000339021 3867 ntBASIC19.73■□□□□ 0.75
TCRBV7S3A2A0A539 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
TCRBV7S3A2A0A539 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.73■□□□□ 0.75
TCRBV7S3A2A0A539 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TCRBV7S3A2A0A539 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TCRBV7S3A2A0A539 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.73■□□□□ 0.75
TCRBV7S3A2A0A539 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TCRBV7S3A2A0A539 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
TCRBV7S3A2A0A539 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
TCRBV7S3A2A0A539 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
TCRBV7S3A2A0A539 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TCRBV7S3A2A0A539 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TCRBV7S3A2A0A539 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.72■□□□□ 0.75
TCRBV7S3A2A0A539 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.72■□□□□ 0.75
TCRBV7S3A2A0A539 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
TCRBV7S3A2A0A539 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
TCRBV7S3A2A0A539 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TCRBV7S3A2A0A539 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TCRBV7S3A2A0A539 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TCRBV7S3A2A0A539 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
TCRBV7S3A2A0A539 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC19.72■□□□□ 0.75
TCRBV7S3A2A0A539 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC19.72■□□□□ 0.75
TCRBV7S3A2A0A539 TK2-208ENST00000545043 1120 ntTSL 2 BASIC19.72■□□□□ 0.75
TCRBV7S3A2A0A539 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
TCRBV7S3A2A0A539 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC19.72■□□□□ 0.75
TCRBV7S3A2A0A539 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC19.72■□□□□ 0.75
TCRBV7S3A2A0A539 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
TCRBV7S3A2A0A539 PFKL-212ENST00000628044 129 ntTSL 3 BASIC19.72■□□□□ 0.75
TCRBV7S3A2A0A539 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
TCRBV7S3A2A0A539 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
TCRBV7S3A2A0A539 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.72■□□□□ 0.75
TCRBV7S3A2A0A539 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
TCRBV7S3A2A0A539 FP475955.4-201ENST00000623131 1990 ntBASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms