Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 HMGN2P11-201ENST00000446054 403 ntBASIC5.14□□□□□ -1.59
KRTAP3-3Q9BYR6 RN7SL271P-201ENST00000487601 295 ntBASIC5.14□□□□□ -1.59
KRTAP3-3Q9BYR6 AC231760.1-201ENST00000498002 260 ntBASIC5.14□□□□□ -1.59
KRTAP3-3Q9BYR6 AC113410.1-201ENST00000505029 247 ntBASIC5.14□□□□□ -1.59
KRTAP3-3Q9BYR6 IGKV2-19-201ENST00000518132 283 ntBASIC5.14□□□□□ -1.59
KRTAP3-3Q9BYR6 BRF2-203ENST00000521170 550 ntTSL 4 BASIC5.14□□□□□ -1.59
KRTAP3-3Q9BYR6 ALG1L9P-205ENST00000532875 549 ntBASIC5.14□□□□□ -1.59
KRTAP3-3Q9BYR6 AC093249.2-201ENST00000563540 482 ntTSL 3 BASIC5.14□□□□□ -1.59
KRTAP3-3Q9BYR6 EEF1DP7-201ENST00000580496 513 ntBASIC5.14□□□□□ -1.59
KRTAP3-3Q9BYR6 RN7SL733P-201ENST00000582253 329 ntBASIC5.14□□□□□ -1.59
KRTAP3-3Q9BYR6 AC024575.1-201ENST00000590399 682 ntTSL 5 BASIC5.14□□□□□ -1.59
KRTAP3-3Q9BYR6 AC011500.2-201ENST00000600089 440 ntBASIC5.14□□□□□ -1.59
KRTAP3-3Q9BYR6 DPPA5P1-201ENST00000600430 340 ntBASIC5.14□□□□□ -1.59
KRTAP3-3Q9BYR6 HOXB13-AS1_2.1-201ENST00000612962 81 ntBASIC5.14□□□□□ -1.59
KRTAP3-3Q9BYR6 RN7SL248P-201ENST00000615117 329 ntBASIC5.14□□□□□ -1.59
KRTAP3-3Q9BYR6 MIR6750-201ENST00000617817 75 ntBASIC5.14□□□□□ -1.59
KRTAP3-3Q9BYR6 RN7SL453P-201ENST00000620275 329 ntBASIC5.14□□□□□ -1.59
KRTAP3-3Q9BYR6 AC005796.1-201ENST00000623214 433 ntBASIC5.14□□□□□ -1.59
KRTAP3-3Q9BYR6 MYO10-203ENST00000505695 4803 ntTSL 2 BASIC5.14□□□□□ -1.59
KRTAP3-3Q9BYR6 CX3CR1-206ENST00000542107 3215 ntAPPRIS P1 TSL 4 BASIC5.14□□□□□ -1.59
KRTAP3-3Q9BYR6 TPRG1-204ENST00000433971 2296 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
KRTAP3-3Q9BYR6 LOXHD1-210ENST00000536736 6848 ntAPPRIS P5 TSL 5 BASIC5.14□□□□□ -1.59
KRTAP3-3Q9BYR6 NET1-202ENST00000380359 3253 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
KRTAP3-3Q9BYR6 MCTP1-204ENST00000505078 2629 ntTSL 2 BASIC5.14□□□□□ -1.59
KRTAP3-3Q9BYR6 KXD1-216ENST00000601630 1327 ntTSL 3 BASIC5.14□□□□□ -1.59
KRTAP3-3Q9BYR6 TMEM254-205ENST00000372281 2042 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
KRTAP3-3Q9BYR6 TTI2-202ENST00000431156 2363 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
KRTAP3-3Q9BYR6 LINC01484-203ENST00000521128 2361 ntTSL 2 BASIC5.14□□□□□ -1.59
KRTAP3-3Q9BYR6 FHDC1-201ENST00000260008 6480 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
KRTAP3-3Q9BYR6 ZNF860-201ENST00000360311 3098 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
KRTAP3-3Q9BYR6 FBXW7-204ENST00000393956 1735 ntTSL 2 BASIC5.14□□□□□ -1.59
KRTAP3-3Q9BYR6 MUSK-201ENST00000189978 2408 ntTSL 5 BASIC5.14□□□□□ -1.59
KRTAP3-3Q9BYR6 UBQLN3-201ENST00000311659 2407 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
KRTAP3-3Q9BYR6 MUSK-204ENST00000374440 2408 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
KRTAP3-3Q9BYR6 WWC2-205ENST00000504005 5247 ntTSL 2 BASIC5.14□□□□□ -1.59
KRTAP3-3Q9BYR6 ZAN-207ENST00000620596 8396 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
KRTAP3-3Q9BYR6 UBE3B-203ENST00000434735 5620 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
KRTAP3-3Q9BYR6 AP002358.1-201ENST00000399003 2805 ntTSL 2 BASIC5.14□□□□□ -1.59
KRTAP3-3Q9BYR6 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
KRTAP3-3Q9BYR6 CYB561A3-221ENST00000546151 3986 ntTSL 3 BASIC5.14□□□□□ -1.59
KRTAP3-3Q9BYR6 RALGAPB-203ENST00000397042 8652 ntAPPRIS ALT1 TSL 1 (best) BASIC5.14□□□□□ -1.59
KRTAP3-3Q9BYR6 NUDT4-206ENST00000549992 3607 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
KRTAP3-3Q9BYR6 L3MBTL2-201ENST00000216237 3296 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
KRTAP3-3Q9BYR6 SLC6A12-202ENST00000397296 3294 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
KRTAP3-3Q9BYR6 NUP98-205ENST00000397007 3698 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
KRTAP3-3Q9BYR6 SPTBN1-202ENST00000356805 8482 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
KRTAP3-3Q9BYR6 PPFIBP2-216ENST00000530181 2965 ntAPPRIS ALT2 TSL 2 BASIC5.13□□□□□ -1.59
KRTAP3-3Q9BYR6 CCNJL-208ENST00000541762 2965 ntTSL 5 BASIC5.13□□□□□ -1.59
KRTAP3-3Q9BYR6 EPB41L1-205ENST00000373946 6327 ntAPPRIS ALT1 TSL 1 (best) BASIC5.13□□□□□ -1.59
KRTAP3-3Q9BYR6 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.13□□□□□ -1.59
KRTAP3-3Q9BYR6 ERI2-215ENST00000569729 2646 ntTSL 2 BASIC5.13□□□□□ -1.59
KRTAP3-3Q9BYR6 BTBD18-201ENST00000422652 3044 ntAPPRIS P1 TSL 4 BASIC5.13□□□□□ -1.59
KRTAP3-3Q9BYR6 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
KRTAP3-3Q9BYR6 DNAH7-203ENST00000410072 1937 ntTSL 2 BASIC5.13□□□□□ -1.59
KRTAP3-3Q9BYR6 GIT2-204ENST00000361006 5444 ntTSL 5 BASIC5.13□□□□□ -1.59
KRTAP3-3Q9BYR6 AC106871.1-201ENST00000568324 3102 ntBASIC5.13□□□□□ -1.59
KRTAP3-3Q9BYR6 MEGF8-202ENST00000334370 10966 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
KRTAP3-3Q9BYR6 MYO1F-201ENST00000338257 4303 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
KRTAP3-3Q9BYR6 GPR50-201ENST00000218316 1951 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
KRTAP3-3Q9BYR6 ERBB3-201ENST00000267101 5919 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
KRTAP3-3Q9BYR6 PDP2-201ENST00000311765 7146 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
KRTAP3-3Q9BYR6 UBE2D3-203ENST00000343106 2389 ntAPPRIS P4 TSL 2 BASIC5.13□□□□□ -1.59
KRTAP3-3Q9BYR6 TUBGCP4-208ENST00000564079 6798 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
KRTAP3-3Q9BYR6 FAM86EP-201ENST00000313946 2845 ntTSL 2 BASIC5.13□□□□□ -1.59
KRTAP3-3Q9BYR6 TTLL3-221ENST00000455274 2848 ntTSL 2 BASIC5.13□□□□□ -1.59
KRTAP3-3Q9BYR6 CTAGE3P-201ENST00000454280 2404 ntBASIC5.13□□□□□ -1.59
KRTAP3-3Q9BYR6 CYP2C8-211ENST00000539050 2024 ntTSL 3 BASIC5.13□□□□□ -1.59
KRTAP3-3Q9BYR6 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.13□□□□□ -1.59
KRTAP3-3Q9BYR6 RNF141-201ENST00000265981 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
KRTAP3-3Q9BYR6 AC124319.2-201ENST00000575034 3651 ntTSL 2 BASIC5.13□□□□□ -1.59
KRTAP3-3Q9BYR6 DYRK4-211ENST00000540757 3272 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
KRTAP3-3Q9BYR6 LAIR1-203ENST00000391742 4901 ntAPPRIS P4 TSL 1 (best) BASIC5.13□□□□□ -1.59
KRTAP3-3Q9BYR6 RAB6C-AS1-201ENST00000412425 2454 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
KRTAP3-3Q9BYR6 BMX-202ENST00000348343 2531 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
KRTAP3-3Q9BYR6 PDIA6-202ENST00000381611 2534 ntTSL 2 BASIC5.13□□□□□ -1.59
KRTAP3-3Q9BYR6 LINC01140-206ENST00000484933 3368 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
KRTAP3-3Q9BYR6 PKP2-201ENST00000070846 4241 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
KRTAP3-3Q9BYR6 OR10G3-201ENST00000303532 942 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
KRTAP3-3Q9BYR6 GNAS-202ENST00000306090 477 ntTSL 5 BASIC5.13□□□□□ -1.59
KRTAP3-3Q9BYR6 CSPG4P1Y-201ENST00000306641 795 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
KRTAP3-3Q9BYR6 CSPG4P2Y-201ENST00000306853 795 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
KRTAP3-3Q9BYR6 FAM86FP-201ENST00000338711 969 ntBASIC5.13□□□□□ -1.59
KRTAP3-3Q9BYR6 RNU6-315P-201ENST00000362666 107 ntBASIC5.13□□□□□ -1.59
KRTAP3-3Q9BYR6 Y_RNA.95-201ENST00000363079 95 ntBASIC5.13□□□□□ -1.59
KRTAP3-3Q9BYR6 Y_RNA.124-201ENST00000363339 93 ntBASIC5.13□□□□□ -1.59
KRTAP3-3Q9BYR6 Y_RNA.360-201ENST00000365512 102 ntBASIC5.13□□□□□ -1.59
KRTAP3-3Q9BYR6 Y_RNA.486-201ENST00000384398 107 ntBASIC5.13□□□□□ -1.59
KRTAP3-3Q9BYR6 RNU6-296P-201ENST00000384608 107 ntBASIC5.13□□□□□ -1.59
KRTAP3-3Q9BYR6 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
KRTAP3-3Q9BYR6 RNA5SP176-201ENST00000390956 110 ntBASIC5.13□□□□□ -1.59
KRTAP3-3Q9BYR6 SNORA40.18-201ENST00000391200 128 ntBASIC5.13□□□□□ -1.59
KRTAP3-3Q9BYR6 U3.26-201ENST00000391236 204 ntBASIC5.13□□□□□ -1.59
KRTAP3-3Q9BYR6 DDX39B-202ENST00000396172 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
KRTAP3-3Q9BYR6 MIR873-201ENST00000401120 77 ntBASIC5.13□□□□□ -1.59
KRTAP3-3Q9BYR6 RPL12P47-201ENST00000406185 127 ntBASIC5.13□□□□□ -1.59
KRTAP3-3Q9BYR6 RN7SKP151-201ENST00000410230 316 ntBASIC5.13□□□□□ -1.59
KRTAP3-3Q9BYR6 AC119751.6-201ENST00000416712 186 ntBASIC5.13□□□□□ -1.59
KRTAP3-3Q9BYR6 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC5.13□□□□□ -1.59
KRTAP3-3Q9BYR6 NDUFB1P1-201ENST00000435191 180 ntBASIC5.13□□□□□ -1.59
KRTAP3-3Q9BYR6 AL049646.2-201ENST00000436848 258 ntTSL 2 BASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 234.3 ms