RNA–Protein interactions for RNA: ENST00000391200.1

SNORA40.18-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.18-201ENST00000391200 AEBP2Q6ZN18 517 aaPredicted RBP11.21□□□□□ -0.61
SNORA40.18-201ENST00000391200 CHIC1Q5VXU3 224 aa10.19□□□□□ -0.78
SNORA40.18-201ENST00000391200 POTEDQ86YR6 584 aa10.11□□□□□ -0.79
SNORA40.18-201ENST00000391200 SENP3Q9H4L4 574 aaPredicted RBP9.44□□□□□ -0.9
SNORA40.18-201ENST00000391200 PHF23Q9BUL5 403 aaPredicted RBP9.34□□□□□ -0.91
SNORA40.18-201ENST00000391200 FOXD1Q16676 465 aa9.1□□□□□ -0.95
SNORA40.18-201ENST00000391200 MSH5O43196 834 aa8.64□□□□□ -1.03
SNORA40.18-201ENST00000391200 PIAS4Q8N2W9 510 aaPredicted RBP8.2□□□□□ -1.1
SNORA40.18-201ENST00000391200 CACNB1Q02641 598 aaPredicted RBP8.04□□□□□ -1.12
SNORA40.18-201ENST00000391200 PPP6R1Q9UPN7 881 aa7.93□□□□□ -1.14
SNORA40.18-201ENST00000391200 ADRA2BP18089 450 aa7.81□□□□□ -1.16
SNORA40.18-201ENST00000391200 POTEHQ6S545 545 aa7.69□□□□□ -1.18
SNORA40.18-201ENST00000391200 MAPK8IP2Q13387 824 aaPredicted RBP7.49□□□□□ -1.21
SNORA40.18-201ENST00000391200 DMRT2Q9Y5R5 561 aa7.41□□□□□ -1.22
SNORA40.18-201ENST00000391200 RNF39Q9H2S5 420 aa7.39□□□□□ -1.23
SNORA40.18-201ENST00000391200 PLPPR3Q6T4P5 718 aa7.22□□□□□ -1.25
SNORA40.18-201ENST00000391200 DCAF8L1A6NGE4 600 aa7.18□□□□□ -1.26
SNORA40.18-201ENST00000391200 C1QBPQ07021 282 aaKnown RBP7.14□□□□□ -1.27
SNORA40.18-201ENST00000391200 SCAF1Q9H7N4 1312 aaKnown RBP6.86□□□□□ -1.31
SNORA40.18-201ENST00000391200 HOXD11P31277 338 aaPredicted RBP6.81□□□□□ -1.32
SNORA40.18-201ENST00000391200 SP7Q8TDD2 431 aaPredicted RBP6.77□□□□□ -1.33
SNORA40.18-201ENST00000391200 PLSCR2Q9NRY7 297 aa6.73□□□□□ -1.33
SNORA40.18-201ENST00000391200 DSG3P32926 999 aa6.66□□□□□ -1.34
SNORA40.18-201ENST00000391200 DNAJC5BQ9UF47 199 aa6.59□□□□□ -1.35
SNORA40.18-201ENST00000391200 CHRDL2Q6WN34 429 aa6.54□□□□□ -1.36
SNORA40.18-201ENST00000391200 SPINK5Q9NQ38 1064 aaPredicted RBP6.54□□□□□ -1.36
SNORA40.18-201ENST00000391200 RNF216Q9NWF9 866 aaPredicted RBP6.48□□□□□ -1.37
SNORA40.18-201ENST00000391200 CAPN15O75808 1086 aa6.45□□□□□ -1.38
SNORA40.18-201ENST00000391200 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.45□□□□□ -1.38
SNORA40.18-201ENST00000391200 EVX2Q03828 476 aa6.39□□□□□ -1.39
SNORA40.18-201ENST00000391200 LHX8Q68G74 356 aa6.37□□□□□ -1.39
SNORA40.18-201ENST00000391200 HAX1O00165 279 aa6.33□□□□□ -1.4
SNORA40.18-201ENST00000391200 ABCB7O75027 752 aa6.32□□□□□ -1.4
SNORA40.18-201ENST00000391200 PPP4R3CPQ6ZMV5 832 aa6.32□□□□□ -1.4
SNORA40.18-201ENST00000391200 CNKSR2Q8WXI2 1034 aa6.32□□□□□ -1.4
SNORA40.18-201ENST00000391200 U3KPZ7 1027 aaPredicted RBP6.31□□□□□ -1.4
SNORA40.18-201ENST00000391200 PIP4P2Q8N4L2 257 aa6.25□□□□□ -1.41
SNORA40.18-201ENST00000391200 RBM42Q9BTD8 480 aaKnown RBP6.18□□□□□ -1.42
SNORA40.18-201ENST00000391200 TRHP20396 242 aaPredicted RBP6.17□□□□□ -1.42
SNORA40.18-201ENST00000391200 POTEMA6NI47 508 aa6.05□□□□□ -1.44
SNORA40.18-201ENST00000391200 GABBR2O75899 941 aa6.04□□□□□ -1.44
SNORA40.18-201ENST00000391200 FXR2P51116 673 aaKnown RBP eCLIP6.04□□□□□ -1.44
SNORA40.18-201ENST00000391200 POTEIP0CG38 1075 aa6.01□□□□□ -1.45
SNORA40.18-201ENST00000391200 POTEGQ6S5H5 508 aa6□□□□□ -1.45
SNORA40.18-201ENST00000391200 ZNF219Q9P2Y4 722 aaPredicted RBP5.98□□□□□ -1.45
SNORA40.18-201ENST00000391200 REM2Q8IYK8 340 aaPredicted RBP5.97□□□□□ -1.45
SNORA40.18-201ENST00000391200 PITPNM1O00562 1244 aa5.94□□□□□ -1.46
SNORA40.18-201ENST00000391200 AKT1S1Q96B36 256 aa5.94□□□□□ -1.46
SNORA40.18-201ENST00000391200 OTUD5Q96G74 571 aa5.89□□□□□ -1.47
SNORA40.18-201ENST00000391200 C19orf67A6NJJ6 358 aa5.88□□□□□ -1.47
SNORA40.18-201ENST00000391200 POTEB2H3BUK9 544 aa5.82□□□□□ -1.48
SNORA40.18-201ENST00000391200 POLA2Q14181 598 aa5.82□□□□□ -1.48
SNORA40.18-201ENST00000391200 PCDH10Q9P2E7 1040 aa5.81□□□□□ -1.48
SNORA40.18-201ENST00000391200 SLC4A2P04920 1241 aa5.78□□□□□ -1.48
SNORA40.18-201ENST00000391200 LCE2DQ5TA82 110 aaPredicted RBP5.78□□□□□ -1.48
SNORA40.18-201ENST00000391200 NPM3O75607 178 aaKnown RBP5.75□□□□□ -1.49
SNORA40.18-201ENST00000391200 PRKAR2AP13861 404 aaKnown RBP5.75□□□□□ -1.49
SNORA40.18-201ENST00000391200 APLP2Q06481 763 aa5.73□□□□□ -1.49
SNORA40.18-201ENST00000391200 OSCARQ8IYS5 282 aa5.66□□□□□ -1.5
SNORA40.18-201ENST00000391200 NCBP3Q53F19 620 aaKnown RBP5.63□□□□□ -1.51
SNORA40.18-201ENST00000391200 FAM163AQ96GL9 167 aaPredicted RBP5.62□□□□□ -1.51
SNORA40.18-201ENST00000391200 CHADLQ6NUI6 762 aa5.61□□□□□ -1.51
SNORA40.18-201ENST00000391200 POTEJP0CG39 1038 aa5.59□□□□□ -1.51
SNORA40.18-201ENST00000391200 DCBLD2Q96PD2 775 aa5.59□□□□□ -1.51
SNORA40.18-201ENST00000391200 CDAN1Q8IWY9 1227 aa5.58□□□□□ -1.52
SNORA40.18-201ENST00000391200 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP5.56□□□□□ -1.52
SNORA40.18-201ENST00000391200 HNRNPUL2Q1KMD3 747 aaKnown RBP5.56□□□□□ -1.52
SNORA40.18-201ENST00000391200 SAMD1Q6SPF0 538 aaPredicted RBP5.56□□□□□ -1.52
SNORA40.18-201ENST00000391200 MMRN1Q13201 1228 aa5.55□□□□□ -1.52
SNORA40.18-201ENST00000391200 CLEC11AQ9Y240 323 aa5.52□□□□□ -1.53
SNORA40.18-201ENST00000391200 PELP1Q8IZL8 1130 aaKnown RBP5.5□□□□□ -1.53
SNORA40.18-201ENST00000391200 CD44P16070 742 aaKnown RBP5.49□□□□□ -1.53
SNORA40.18-201ENST00000391200 SPNS2Q8IVW8 549 aa5.47□□□□□ -1.53
SNORA40.18-201ENST00000391200 GALR2O43603 387 aaPredicted RBP5.46□□□□□ -1.54
SNORA40.18-201ENST00000391200 ATF5Q9Y2D1 282 aaPredicted RBP5.41□□□□□ -1.54
SNORA40.18-201ENST00000391200 ZBTB12Q9Y330 459 aaPredicted RBP5.39□□□□□ -1.55
SNORA40.18-201ENST00000391200 CLCN6P51797 869 aa5.38□□□□□ -1.55
SNORA40.18-201ENST00000391200 SPDYE1Q8NFV5 336 aaPredicted RBP5.37□□□□□ -1.55
SNORA40.18-201ENST00000391200 ZNF579Q8NAF0 562 aaKnown RBP5.34□□□□□ -1.55
SNORA40.18-201ENST00000391200 METRNQ9UJH8 293 aa5.32□□□□□ -1.56
SNORA40.18-201ENST00000391200 FARP1Q9Y4F1 1045 aaPredicted RBP5.32□□□□□ -1.56
SNORA40.18-201ENST00000391200 ZRANB1Q9UGI0 708 aa5.3□□□□□ -1.56
SNORA40.18-201ENST00000391200 ST18O60284 1047 aa5.27□□□□□ -1.57
SNORA40.18-201ENST00000391200 MAMSTRQ6ZN01 415 aa5.27□□□□□ -1.57
SNORA40.18-201ENST00000391200 SPDYE2BA6NHP3 402 aa5.26□□□□□ -1.57
SNORA40.18-201ENST00000391200 SPDYE6P0CI01 402 aa5.26□□□□□ -1.57
SNORA40.18-201ENST00000391200 SPDYE2Q495Y8 402 aa5.26□□□□□ -1.57
SNORA40.18-201ENST00000391200 POTEFA5A3E0 1075 aa5.25□□□□□ -1.57
SNORA40.18-201ENST00000391200 PRR29P0C7W0 189 aa5.25□□□□□ -1.57
SNORA40.18-201ENST00000391200 SCUBE2Q9NQ36 999 aa5.24□□□□□ -1.57
SNORA40.18-201ENST00000391200 PHF12Q96QT6 1004 aa5.21□□□□□ -1.58
SNORA40.18-201ENST00000391200 ATMINO43313 823 aaPredicted RBP5.2□□□□□ -1.58
SNORA40.18-201ENST00000391200 MYCNP04198 464 aaPredicted RBP5.2□□□□□ -1.58
SNORA40.18-201ENST00000391200 C7P10643 843 aa5.2□□□□□ -1.58
SNORA40.18-201ENST00000391200 ASTLQ6HA08 431 aaPredicted RBP5.2□□□□□ -1.58
SNORA40.18-201ENST00000391200 SLC39A7Q92504 469 aa5.18□□□□□ -1.58
SNORA40.18-201ENST00000391200 SSUH2Q9Y2M2 353 aa5.16□□□□□ -1.58
SNORA40.18-201ENST00000391200 KRTAP3-3Q9BYR6 98 aa5.13□□□□□ -1.59
SNORA40.18-201ENST00000391200 KRTAP3-2Q9BYR7 98 aa5.13□□□□□ -1.59
SNORA40.18-201ENST00000391200 MARVELD3Q96A59 401 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms