RNA–Protein interactions for RNA: ENST00000390497.1

TRAJ40-201, Transcript of T cell receptor alpha joining 40, humanhuman

APPRIS P1 BASIC

Gene TRAJ40, Length 61 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ40-201ENST00000390497 CHIC1Q5VXU3 224 aa12.05□□□□□ -0.48
TRAJ40-201ENST00000390497 AEBP2Q6ZN18 517 aaPredicted RBP11.93□□□□□ -0.5
TRAJ40-201ENST00000390497 PHF23Q9BUL5 403 aaPredicted RBP10.58□□□□□ -0.72
TRAJ40-201ENST00000390497 SENP3Q9H4L4 574 aaPredicted RBP10.19□□□□□ -0.78
TRAJ40-201ENST00000390497 PLPPR3Q6T4P5 718 aa9.98□□□□□ -0.81
TRAJ40-201ENST00000390497 FOXD1Q16676 465 aa9.34□□□□□ -0.91
TRAJ40-201ENST00000390497 ADRA2BP18089 450 aa9.23□□□□□ -0.93
TRAJ40-201ENST00000390497 PPP6R1Q9UPN7 881 aa9.22□□□□□ -0.93
TRAJ40-201ENST00000390497 KCNA4P22459 653 aa8.9□□□□□ -0.98
TRAJ40-201ENST00000390497 PIAS4Q8N2W9 510 aaPredicted RBP8.9□□□□□ -0.98
TRAJ40-201ENST00000390497 PPP4R3CPQ6ZMV5 832 aa8.8□□□□□ -1
TRAJ40-201ENST00000390497 NCBP3Q53F19 620 aaKnown RBP8.75□□□□□ -1.01
TRAJ40-201ENST00000390497 EHMT2Q96KQ7 1210 aa8.64□□□□□ -1.03
TRAJ40-201ENST00000390497 SCAF1Q9H7N4 1312 aaKnown RBP8.61□□□□□ -1.03
TRAJ40-201ENST00000390497 SLC4A1APQ9BWU0 796 aaKnown RBP8.59□□□□□ -1.03
TRAJ40-201ENST00000390497 MSH5O43196 834 aa8.58□□□□□ -1.04
TRAJ40-201ENST00000390497 CNKSR2Q8WXI2 1034 aa8.52□□□□□ -1.05
TRAJ40-201ENST00000390497 NPM3O75607 178 aaKnown RBP8.51□□□□□ -1.05
TRAJ40-201ENST00000390497 CSRNP3Q8WYN3 585 aa8.44□□□□□ -1.06
TRAJ40-201ENST00000390497 DNAJC5BQ9UF47 199 aa8.32□□□□□ -1.08
TRAJ40-201ENST00000390497 MAPK8IP2Q13387 824 aaPredicted RBP8.27□□□□□ -1.09
TRAJ40-201ENST00000390497 RNF216Q9NWF9 866 aaPredicted RBP8.27□□□□□ -1.09
TRAJ40-201ENST00000390497 FOXD4L1Q9NU39 408 aa8.16□□□□□ -1.1
TRAJ40-201ENST00000390497 DMRT2Q9Y5R5 561 aa8.16□□□□□ -1.1
TRAJ40-201ENST00000390497 ZBTB22O15209 634 aa8.15□□□□□ -1.1
TRAJ40-201ENST00000390497 HOXD11P31277 338 aaPredicted RBP8.13□□□□□ -1.11
TRAJ40-201ENST00000390497 SLC4A2P04920 1241 aa7.93□□□□□ -1.14
TRAJ40-201ENST00000390497 ATXN8OSP0DMR3 200 aa7.93□□□□□ -1.14
TRAJ40-201ENST00000390497 MYCNP04198 464 aaPredicted RBP7.9□□□□□ -1.14
TRAJ40-201ENST00000390497 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.77□□□□□ -1.17
TRAJ40-201ENST00000390497 HNRNPUL2Q1KMD3 747 aaKnown RBP7.77□□□□□ -1.17
TRAJ40-201ENST00000390497 DCAF8L1A6NGE4 600 aa7.76□□□□□ -1.17
TRAJ40-201ENST00000390497 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.76□□□□□ -1.17
TRAJ40-201ENST00000390497 SAMD1Q6SPF0 538 aaPredicted RBP7.72□□□□□ -1.17
TRAJ40-201ENST00000390497 APLP2Q06481 763 aa7.62□□□□□ -1.19
TRAJ40-201ENST00000390497 FKBP8Q14318 412 aa7.61□□□□□ -1.19
TRAJ40-201ENST00000390497 U3KPZ7 1027 aaPredicted RBP7.6□□□□□ -1.19
TRAJ40-201ENST00000390497 AMER1Q5JTC6 1135 aaPredicted RBP7.58□□□□□ -1.2
TRAJ40-201ENST00000390497 ATF5Q9Y2D1 282 aaPredicted RBP7.56□□□□□ -1.2
TRAJ40-201ENST00000390497 ZNF219Q9P2Y4 722 aaPredicted RBP7.5□□□□□ -1.21
TRAJ40-201ENST00000390497 RTN4Q9NQC3 1192 aaKnown RBP7.46□□□□□ -1.22
TRAJ40-201ENST00000390497 FBXO3Q9UK99 471 aa7.37□□□□□ -1.23
TRAJ40-201ENST00000390497 FBLN2P98095 1184 aa7.36□□□□□ -1.23
TRAJ40-201ENST00000390497 SPDYE4A6NLX3 237 aa7.33□□□□□ -1.24
TRAJ40-201ENST00000390497 C1QBPQ07021 282 aaKnown RBP7.33□□□□□ -1.24
TRAJ40-201ENST00000390497 RNF39Q9H2S5 420 aa7.33□□□□□ -1.24
TRAJ40-201ENST00000390497 SLC24A1O60721 1099 aa7.32□□□□□ -1.24
TRAJ40-201ENST00000390497 TRHP20396 242 aaPredicted RBP7.31□□□□□ -1.24
TRAJ40-201ENST00000390497 POLA2Q14181 598 aa7.3□□□□□ -1.24
TRAJ40-201ENST00000390497 CAPN15O75808 1086 aa7.28□□□□□ -1.24
TRAJ40-201ENST00000390497 ZBTB12Q9Y330 459 aaPredicted RBP7.28□□□□□ -1.24
TRAJ40-201ENST00000390497 MKRN4PQ13434 485 aaPredicted RBP7.27□□□□□ -1.25
TRAJ40-201ENST00000390497 SPINK5Q9NQ38 1064 aaPredicted RBP7.27□□□□□ -1.25
TRAJ40-201ENST00000390497 PROM2Q8N271 834 aa7.25□□□□□ -1.25
TRAJ40-201ENST00000390497 VASPP50552 380 aaPredicted RBP7.16□□□□□ -1.26
TRAJ40-201ENST00000390497 POTEDQ86YR6 584 aa7.15□□□□□ -1.26
TRAJ40-201ENST00000390497 ABCB7O75027 752 aa7.11□□□□□ -1.27
TRAJ40-201ENST00000390497 DSG3P32926 999 aa7.08□□□□□ -1.28
TRAJ40-201ENST00000390497 ZNF692Q9BU19 519 aaPredicted RBP7.08□□□□□ -1.28
TRAJ40-201ENST00000390497 STAG3Q9UJ98 1225 aa7.08□□□□□ -1.28
TRAJ40-201ENST00000390497 SPDYE2BA6NHP3 402 aa7.07□□□□□ -1.28
TRAJ40-201ENST00000390497 SPDYE6P0CI01 402 aa7.07□□□□□ -1.28
TRAJ40-201ENST00000390497 SPDYE2Q495Y8 402 aa7.07□□□□□ -1.28
TRAJ40-201ENST00000390497 IFNLR1Q8IU57 520 aaPredicted RBP7.07□□□□□ -1.28
TRAJ40-201ENST00000390497 KLHL34Q8N239 644 aa7.01□□□□□ -1.29
TRAJ40-201ENST00000390497 SPOCK2Q92563 424 aa7□□□□□ -1.29
TRAJ40-201ENST00000390497 SSUH2Q9Y2M2 353 aa7□□□□□ -1.29
TRAJ40-201ENST00000390497 PLEKHG5O94827 1062 aa6.97□□□□□ -1.29
TRAJ40-201ENST00000390497 OSCARQ8IYS5 282 aa6.97□□□□□ -1.29
TRAJ40-201ENST00000390497 PLCD3Q8N3E9 789 aa6.97□□□□□ -1.29
TRAJ40-201ENST00000390497 PLCB2Q00722 1185 aa6.96□□□□□ -1.3
TRAJ40-201ENST00000390497 PABPN1Q86U42 306 aaKnown RBP eCLIP6.96□□□□□ -1.3
TRAJ40-201ENST00000390497 PKD2Q13563 968 aa6.95□□□□□ -1.3
TRAJ40-201ENST00000390497 MIER1Q8N108 512 aa6.95□□□□□ -1.3
TRAJ40-201ENST00000390497 ZBTB47Q9UFB7 747 aaPredicted RBP6.94□□□□□ -1.3
TRAJ40-201ENST00000390497 DCAF8L2P0C7V8 631 aa6.93□□□□□ -1.3
TRAJ40-201ENST00000390497 CACNB1Q02641 598 aaPredicted RBP6.92□□□□□ -1.3
TRAJ40-201ENST00000390497 ECM2O94769 699 aaPredicted RBP6.89□□□□□ -1.31
TRAJ40-201ENST00000390497 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.87□□□□□ -1.31
TRAJ40-201ENST00000390497 BBXQ8WY36 941 aaPredicted RBP6.86□□□□□ -1.31
TRAJ40-201ENST00000390497 TRIM41Q8WV44 630 aa6.84□□□□□ -1.31
TRAJ40-201ENST00000390497 HAP1P54257 671 aaPredicted RBP6.83□□□□□ -1.32
TRAJ40-201ENST00000390497 VSIG10Q8N0Z9 540 aa6.82□□□□□ -1.32
TRAJ40-201ENST00000390497 RBM42Q9BTD8 480 aaKnown RBP6.81□□□□□ -1.32
TRAJ40-201ENST00000390497 CIZ1Q9ULV3 898 aaPredicted RBP6.8□□□□□ -1.32
TRAJ40-201ENST00000390497 SPDYE1Q8NFV5 336 aaPredicted RBP6.79□□□□□ -1.32
TRAJ40-201ENST00000390497 AKT1S1Q96B36 256 aa6.79□□□□□ -1.32
TRAJ40-201ENST00000390497 GSE1Q14687 1217 aa6.78□□□□□ -1.32
TRAJ40-201ENST00000390497 RGL2O15211 777 aa6.76□□□□□ -1.33
TRAJ40-201ENST00000390497 TAOK2Q9UL54 1235 aa6.76□□□□□ -1.33
TRAJ40-201ENST00000390497 SPRYD3Q8NCJ5 442 aa6.75□□□□□ -1.33
TRAJ40-201ENST00000390497 PAXIP1Q6ZW49 1069 aaPredicted RBP6.74□□□□□ -1.33
TRAJ40-201ENST00000390497 NPM1P06748 294 aaKnown RBP eCLIP6.73□□□□□ -1.33
TRAJ40-201ENST00000390497 BCANQ96GW7 911 aa6.73□□□□□ -1.33
TRAJ40-201ENST00000390497 PRR29P0C7W0 189 aa6.72□□□□□ -1.33
TRAJ40-201ENST00000390497 CFAP44Q96MT7 982 aa6.72□□□□□ -1.33
TRAJ40-201ENST00000390497 CHGAP10645 457 aaKnown RBP6.71□□□□□ -1.34
TRAJ40-201ENST00000390497 DCAF8Q5TAQ9 597 aa6.7□□□□□ -1.34
TRAJ40-201ENST00000390497 NUBP1P53384 320 aa6.69□□□□□ -1.34
TRAJ40-201ENST00000390497 CLEC11AQ9Y240 323 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms