RNA–Protein interactions for RNA: ENST00000338257.12

MYO1F-201, Transcript of myosin IF, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MYO1F, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MYO1F-201ENST00000338257 NISCHQ9Y2I1 1504 aa20.94■□□□□ 0.94
MYO1F-201ENST00000338257 DCAF8L2P0C7V8 631 aa19.58■□□□□ 0.73
MYO1F-201ENST00000338257 SHROOM4Q9ULL8 1493 aa18.77■□□□□ 0.59
MYO1F-201ENST00000338257 SUPT5HO00267 1087 aaKnown RBP18.73■□□□□ 0.59
MYO1F-201ENST00000338257 ABCC9O60706 1549 aa18.14■□□□□ 0.49
MYO1F-201ENST00000338257 PELP1Q8IZL8 1130 aaKnown RBP18.07■□□□□ 0.48
MYO1F-201ENST00000338257 MYT1Q01538 1121 aa18■□□□□ 0.47
MYO1F-201ENST00000338257 EHMT2Q96KQ7 1210 aa17.99■□□□□ 0.47
MYO1F-201ENST00000338257 CCDC180Q9P1Z9 1646 aa17.92■□□□□ 0.46
MYO1F-201ENST00000338257 FAM9AQ8IZU1 332 aaPredicted RBP17.61■□□□□ 0.41
MYO1F-201ENST00000338257 PABPN1Q86U42 306 aaKnown RBP eCLIP17.44■□□□□ 0.38
MYO1F-201ENST00000338257 ZCCHC6Q5VYS8 1495 aaKnown RBP17.38■□□□□ 0.37
MYO1F-201ENST00000338257 TTBK1Q5TCY1 1321 aaPredicted RBP17.28■□□□□ 0.36
MYO1F-201ENST00000338257 RB1CC1Q8TDY2 1594 aa17.26■□□□□ 0.35
MYO1F-201ENST00000338257 PCGF6Q9BYE7 350 aa17.25■□□□□ 0.35
MYO1F-201ENST00000338257 TRIM41Q8WV44 630 aa17.21■□□□□ 0.35
MYO1F-201ENST00000338257 NACADO15069 1562 aa17.18■□□□□ 0.34
MYO1F-201ENST00000338257 RANGAP1P46060 587 aaPredicted RBP17.14■□□□□ 0.33
MYO1F-201ENST00000338257 SCRIBQ14160 1630 aa17.07■□□□□ 0.32
MYO1F-201ENST00000338257 LOC105371045A0A1W2PR82 267 aa17.01■□□□□ 0.31
MYO1F-201ENST00000338257 CHIC1Q5VXU3 224 aa17.01■□□□□ 0.31
MYO1F-201ENST00000338257 PPARGC1BQ86YN6 1023 aaKnown RBP16.98■□□□□ 0.31
MYO1F-201ENST00000338257 DCAF1Q9Y4B6 1507 aa16.97■□□□□ 0.31
MYO1F-201ENST00000338257 APLP2Q06481 763 aa16.86■□□□□ 0.29
MYO1F-201ENST00000338257 UBTFP17480 764 aaKnown RBP16.84■□□□□ 0.29
MYO1F-201ENST00000338257 MYO15BQ96JP2 1530 aa16.8■□□□□ 0.28
MYO1F-201ENST00000338257 ATP1B4Q9UN42 357 aaPredicted RBP16.67■□□□□ 0.26
MYO1F-201ENST00000338257 ERICH6Q7L0X2 663 aa16.61■□□□□ 0.25
MYO1F-201ENST00000338257 CCER1Q8TC90 406 aaPredicted RBP16.59■□□□□ 0.25
MYO1F-201ENST00000338257 TRIM26Q12899 539 aaPredicted RBP16.46■□□□□ 0.22
MYO1F-201ENST00000338257 BAZ1AQ9NRL2 1556 aaPredicted RBP16.38■□□□□ 0.21
MYO1F-201ENST00000338257 HRCP23327 699 aa16.34■□□□□ 0.21
MYO1F-201ENST00000338257 CECR2Q9BXF3 1484 aa16.33■□□□□ 0.21
MYO1F-201ENST00000338257 BAZ1BQ9UIG0 1483 aaKnown RBP16.33■□□□□ 0.21
MYO1F-201ENST00000338257 RSF1Q96T23 1441 aaPredicted RBP16.33■□□□□ 0.2
MYO1F-201ENST00000338257 ITGAEP38570 1179 aa16.33■□□□□ 0.2
MYO1F-201ENST00000338257 HNRNPUL2Q1KMD3 747 aaKnown RBP16.3■□□□□ 0.2
MYO1F-201ENST00000338257 ZEB1P37275 1124 aaPredicted RBP16.27■□□□□ 0.2
MYO1F-201ENST00000338257 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.23■□□□□ 0.19
MYO1F-201ENST00000338257 SMARCA2P51531 1590 aa16.17■□□□□ 0.18
MYO1F-201ENST00000338257 CENPBP07199 599 aaPredicted RBP16.15■□□□□ 0.18
MYO1F-201ENST00000338257 MROH2BQ7Z745 1585 aa16.14■□□□□ 0.17
MYO1F-201ENST00000338257 YTHDC1Q96MU7 727 aaKnown RBP16.13■□□□□ 0.17
MYO1F-201ENST00000338257 FBLN2P98095 1184 aa16.06■□□□□ 0.16
MYO1F-201ENST00000338257 ERCC6Q03468 1493 aa16.04■□□□□ 0.16
MYO1F-201ENST00000338257 ATAD2BQ9ULI0 1458 aa16.04■□□□□ 0.16
MYO1F-201ENST00000338257 CSRNP3Q8WYN3 585 aa16.01■□□□□ 0.15
MYO1F-201ENST00000338257 SMARCA4P51532 1647 aa16.01■□□□□ 0.15
MYO1F-201ENST00000338257 EIF4G1Q04637 1599 aaKnown RBP16■□□□□ 0.15
MYO1F-201ENST00000338257 P3H3Q8IVL6 736 aa15.95■□□□□ 0.14
MYO1F-201ENST00000338257 BICRAQ9NZM4 1560 aa15.94■□□□□ 0.14
MYO1F-201ENST00000338257 SLC24A1O60721 1099 aa15.92■□□□□ 0.14
MYO1F-201ENST00000338257 PRKCSHP14314 528 aaPredicted RBP15.91■□□□□ 0.14
MYO1F-201ENST00000338257 PDS5BQ9NTI5 1447 aa15.91■□□□□ 0.14
MYO1F-201ENST00000338257 BCL11AQ9H165 835 aa15.9■□□□□ 0.14
MYO1F-201ENST00000338257 WIZO95785 1651 aa15.88■□□□□ 0.13
MYO1F-201ENST00000338257 FAM50AQ14320 339 aaKnown RBP15.87■□□□□ 0.13
MYO1F-201ENST00000338257 NCAPD3P42695 1498 aa15.87■□□□□ 0.13
MYO1F-201ENST00000338257 TOP2AP11388 1531 aaKnown RBP15.87■□□□□ 0.13
MYO1F-201ENST00000338257 ARID3CA6NKF2 412 aa15.86■□□□□ 0.13
MYO1F-201ENST00000338257 CCDC88BA6NC98 1476 aa15.86■□□□□ 0.13
MYO1F-201ENST00000338257 CADPSQ9ULU8 1353 aa15.85■□□□□ 0.13
MYO1F-201ENST00000338257 CNGB1Q14028 1251 aaPredicted RBP15.82■□□□□ 0.12
MYO1F-201ENST00000338257 CC2D2AQ9P2K1 1620 aa15.81■□□□□ 0.12
MYO1F-201ENST00000338257 WRNQ14191 1432 aaPredicted RBP eCLIP15.8■□□□□ 0.12
MYO1F-201ENST00000338257 DNAJC5BQ9UF47 199 aa15.77■□□□□ 0.11
MYO1F-201ENST00000338257 CHMP7Q8WUX9 453 aaPredicted RBP15.75■□□□□ 0.11
MYO1F-201ENST00000338257 UNC13AQ9UPW8 1703 aa15.75■□□□□ 0.11
MYO1F-201ENST00000338257 POLR3GLQ9BT43 218 aa15.74■□□□□ 0.11
MYO1F-201ENST00000338257 NEUROD1Q13562 356 aa15.73■□□□□ 0.11
MYO1F-201ENST00000338257 MYT1LQ9UL68 1186 aa15.72■□□□□ 0.11
MYO1F-201ENST00000338257 DIEXFQ68CQ4 756 aaKnown RBP15.72■□□□□ 0.11
MYO1F-201ENST00000338257 SCAF1Q9H7N4 1312 aaKnown RBP15.66■□□□□ 0.1
MYO1F-201ENST00000338257 CEP164Q9UPV0 1460 aa15.66■□□□□ 0.1
MYO1F-201ENST00000338257 HMGXB3Q12766 1538 aa15.65■□□□□ 0.1
MYO1F-201ENST00000338257 TRIM52Q96A61 297 aa15.62■□□□□ 0.09
MYO1F-201ENST00000338257 FANCD2Q9BXW9 1451 aa15.62■□□□□ 0.09
MYO1F-201ENST00000338257 KIF27Q86VH2 1401 aa15.62■□□□□ 0.09
MYO1F-201ENST00000338257 EEA1Q15075 1411 aa15.55■□□□□ 0.08
MYO1F-201ENST00000338257 SOGA1O94964 1423 aa15.55■□□□□ 0.08
MYO1F-201ENST00000338257 NPM1P06748 294 aaKnown RBP eCLIP15.52■□□□□ 0.08
MYO1F-201ENST00000338257 CUX2O14529 1486 aa15.52■□□□□ 0.08
MYO1F-201ENST00000338257 ABCC8Q09428 1581 aa15.52■□□□□ 0.07
MYO1F-201ENST00000338257 GTF3C3Q9Y5Q9 886 aa15.52■□□□□ 0.07
MYO1F-201ENST00000338257 TDRD9Q8NDG6 1382 aaKnown RBP15.48■□□□□ 0.07
MYO1F-201ENST00000338257 ZNF326Q5BKZ1 582 aaKnown RBP15.47■□□□□ 0.07
MYO1F-201ENST00000338257 CFTRP13569 1480 aa15.46■□□□□ 0.07
MYO1F-201ENST00000338257 NESP48681 1621 aa15.46■□□□□ 0.07
MYO1F-201ENST00000338257 ZNF777Q9ULD5 760 aaPredicted RBP15.46■□□□□ 0.07
MYO1F-201ENST00000338257 NEFLP07196 543 aa15.45■□□□□ 0.06
MYO1F-201ENST00000338257 CDK11AQ9UQ88 783 aaPredicted RBP15.44■□□□□ 0.06
MYO1F-201ENST00000338257 CLIP1P30622 1438 aa15.44■□□□□ 0.06
MYO1F-201ENST00000338257 CEP162Q5TB80 1403 aa15.44■□□□□ 0.06
MYO1F-201ENST00000338257 ZNF316A6NFI3 1004 aaPredicted RBP15.43■□□□□ 0.06
MYO1F-201ENST00000338257 EIF5BO60841 1220 aaKnown RBP15.43■□□□□ 0.06
MYO1F-201ENST00000338257 PEG3Q9GZU2 1588 aa15.42■□□□□ 0.06
MYO1F-201ENST00000338257 CARMIL1Q5VZK9 1371 aa15.4■□□□□ 0.06
MYO1F-201ENST00000338257 CHIC2Q9UKJ5 165 aa15.39■□□□□ 0.05
MYO1F-201ENST00000338257 ACIN1Q9UKV3 1341 aaKnown RBP15.38■□□□□ 0.05
MYO1F-201ENST00000338257 MRC2Q9UBG0 1479 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms