Protein–RNA interactions for Protein: Q9Y2Q9

MRPS28, 28S ribosomal protein S28, mitochondrial, humanhuman

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28Q9Y2Q9 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
MRPS28Q9Y2Q9 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC16.75■□□□□ 0.27
MRPS28Q9Y2Q9 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MRPS28Q9Y2Q9 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC16.75■□□□□ 0.27
MRPS28Q9Y2Q9 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MRPS28Q9Y2Q9 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
MRPS28Q9Y2Q9 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MRPS28Q9Y2Q9 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
MRPS28Q9Y2Q9 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MRPS28Q9Y2Q9 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
MRPS28Q9Y2Q9 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
MRPS28Q9Y2Q9 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MRPS28Q9Y2Q9 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC16.75■□□□□ 0.27
MRPS28Q9Y2Q9 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
MRPS28Q9Y2Q9 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
MRPS28Q9Y2Q9 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
MRPS28Q9Y2Q9 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC16.74■□□□□ 0.27
MRPS28Q9Y2Q9 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC16.74■□□□□ 0.27
MRPS28Q9Y2Q9 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC16.74■□□□□ 0.27
MRPS28Q9Y2Q9 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC16.74■□□□□ 0.27
MRPS28Q9Y2Q9 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC16.74■□□□□ 0.27
MRPS28Q9Y2Q9 AC116351.2-201ENST00000606540 1585 ntBASIC16.74■□□□□ 0.27
MRPS28Q9Y2Q9 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
MRPS28Q9Y2Q9 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
MRPS28Q9Y2Q9 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
MRPS28Q9Y2Q9 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC16.74■□□□□ 0.27
MRPS28Q9Y2Q9 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
MRPS28Q9Y2Q9 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
MRPS28Q9Y2Q9 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
MRPS28Q9Y2Q9 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC16.74■□□□□ 0.27
MRPS28Q9Y2Q9 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC16.74■□□□□ 0.27
MRPS28Q9Y2Q9 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
MRPS28Q9Y2Q9 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
MRPS28Q9Y2Q9 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
MRPS28Q9Y2Q9 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
MRPS28Q9Y2Q9 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
MRPS28Q9Y2Q9 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MRPS28Q9Y2Q9 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
MRPS28Q9Y2Q9 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC16.73■□□□□ 0.27
MRPS28Q9Y2Q9 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
MRPS28Q9Y2Q9 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MRPS28Q9Y2Q9 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
MRPS28Q9Y2Q9 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
MRPS28Q9Y2Q9 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MRPS28Q9Y2Q9 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
MRPS28Q9Y2Q9 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC16.73■□□□□ 0.27
MRPS28Q9Y2Q9 AC093787.1-201ENST00000450396 207 ntBASIC16.73■□□□□ 0.27
MRPS28Q9Y2Q9 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC16.73■□□□□ 0.27
MRPS28Q9Y2Q9 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
MRPS28Q9Y2Q9 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC16.73■□□□□ 0.27
MRPS28Q9Y2Q9 ISCU-212ENST00000547005 795 ntTSL 3 BASIC16.73■□□□□ 0.27
MRPS28Q9Y2Q9 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC16.73■□□□□ 0.27
MRPS28Q9Y2Q9 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
MRPS28Q9Y2Q9 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MRPS28Q9Y2Q9 MOK-233ENST00000524214 1539 ntTSL 2 BASIC16.73■□□□□ 0.27
MRPS28Q9Y2Q9 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
MRPS28Q9Y2Q9 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MRPS28Q9Y2Q9 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MRPS28Q9Y2Q9 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC16.73■□□□□ 0.27
MRPS28Q9Y2Q9 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
MRPS28Q9Y2Q9 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
MRPS28Q9Y2Q9 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC16.73■□□□□ 0.27
MRPS28Q9Y2Q9 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
MRPS28Q9Y2Q9 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
MRPS28Q9Y2Q9 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
MRPS28Q9Y2Q9 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MRPS28Q9Y2Q9 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MRPS28Q9Y2Q9 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
MRPS28Q9Y2Q9 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
MRPS28Q9Y2Q9 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
MRPS28Q9Y2Q9 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
MRPS28Q9Y2Q9 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
MRPS28Q9Y2Q9 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
MRPS28Q9Y2Q9 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC16.72■□□□□ 0.27
MRPS28Q9Y2Q9 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC16.72■□□□□ 0.27
MRPS28Q9Y2Q9 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
MRPS28Q9Y2Q9 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MRPS28Q9Y2Q9 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
MRPS28Q9Y2Q9 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
MRPS28Q9Y2Q9 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
MRPS28Q9Y2Q9 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
MRPS28Q9Y2Q9 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
MRPS28Q9Y2Q9 CALM3-202ENST00000391918 702 ntTSL 2 BASIC16.72■□□□□ 0.27
MRPS28Q9Y2Q9 LSM12P1-201ENST00000411836 588 ntBASIC16.72■□□□□ 0.27
MRPS28Q9Y2Q9 AC026271.2-201ENST00000428091 497 ntBASIC16.72■□□□□ 0.27
MRPS28Q9Y2Q9 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MRPS28Q9Y2Q9 MDK-213ENST00000617138 635 ntTSL 2 BASIC16.72■□□□□ 0.27
MRPS28Q9Y2Q9 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC16.72■□□□□ 0.27
MRPS28Q9Y2Q9 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC16.72■□□□□ 0.27
MRPS28Q9Y2Q9 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
MRPS28Q9Y2Q9 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MRPS28Q9Y2Q9 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
MRPS28Q9Y2Q9 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
MRPS28Q9Y2Q9 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
MRPS28Q9Y2Q9 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
MRPS28Q9Y2Q9 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MRPS28Q9Y2Q9 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC16.72■□□□□ 0.27
MRPS28Q9Y2Q9 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC16.72■□□□□ 0.27
MRPS28Q9Y2Q9 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MRPS28Q9Y2Q9 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms