Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
HHLA3Q9XRX5 TREX1-205ENST00000625293 1783 ntBASIC14.22□□□□□ -0.13
HHLA3Q9XRX5 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
HHLA3Q9XRX5 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC14.22□□□□□ -0.13
HHLA3Q9XRX5 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC14.22□□□□□ -0.13
HHLA3Q9XRX5 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HHLA3Q9XRX5 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HHLA3Q9XRX5 SLC29A4P1-201ENST00000398760 971 ntBASIC14.22□□□□□ -0.13
HHLA3Q9XRX5 BX276092.2-201ENST00000417668 665 ntBASIC14.22□□□□□ -0.13
HHLA3Q9XRX5 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC14.22□□□□□ -0.13
HHLA3Q9XRX5 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC14.22□□□□□ -0.13
HHLA3Q9XRX5 PPP1R14BP3-201ENST00000509033 445 ntBASIC14.22□□□□□ -0.13
HHLA3Q9XRX5 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC14.22□□□□□ -0.13
HHLA3Q9XRX5 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC14.22□□□□□ -0.13
HHLA3Q9XRX5 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC14.22□□□□□ -0.13
HHLA3Q9XRX5 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
HHLA3Q9XRX5 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC14.22□□□□□ -0.13
HHLA3Q9XRX5 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC14.22□□□□□ -0.13
HHLA3Q9XRX5 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
HHLA3Q9XRX5 HCG11-201ENST00000411553 5696 ntBASIC14.22□□□□□ -0.13
HHLA3Q9XRX5 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC14.22□□□□□ -0.13
HHLA3Q9XRX5 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
HHLA3Q9XRX5 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
HHLA3Q9XRX5 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC14.22□□□□□ -0.13
HHLA3Q9XRX5 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HHLA3Q9XRX5 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC14.22□□□□□ -0.13
HHLA3Q9XRX5 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC14.22□□□□□ -0.13
HHLA3Q9XRX5 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC14.22□□□□□ -0.13
HHLA3Q9XRX5 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HHLA3Q9XRX5 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HHLA3Q9XRX5 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HHLA3Q9XRX5 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
HHLA3Q9XRX5 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HHLA3Q9XRX5 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
HHLA3Q9XRX5 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HHLA3Q9XRX5 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HHLA3Q9XRX5 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HHLA3Q9XRX5 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
HHLA3Q9XRX5 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HHLA3Q9XRX5 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HHLA3Q9XRX5 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HHLA3Q9XRX5 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC14.21□□□□□ -0.13
HHLA3Q9XRX5 PCDHB18P-201ENST00000524813 2368 ntBASIC14.21□□□□□ -0.13
HHLA3Q9XRX5 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HHLA3Q9XRX5 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HHLA3Q9XRX5 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC14.21□□□□□ -0.13
HHLA3Q9XRX5 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC14.21□□□□□ -0.13
HHLA3Q9XRX5 GPX1P1-201ENST00000388829 606 ntBASIC14.21□□□□□ -0.13
HHLA3Q9XRX5 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC14.21□□□□□ -0.13
HHLA3Q9XRX5 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC14.21□□□□□ -0.13
HHLA3Q9XRX5 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC14.21□□□□□ -0.13
HHLA3Q9XRX5 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC14.21□□□□□ -0.13
HHLA3Q9XRX5 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HHLA3Q9XRX5 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC14.21□□□□□ -0.13
HHLA3Q9XRX5 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
HHLA3Q9XRX5 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
HHLA3Q9XRX5 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
HHLA3Q9XRX5 AL032819.2-201ENST00000624543 2162 ntBASIC14.21□□□□□ -0.13
HHLA3Q9XRX5 TMEM179-206ENST00000616017 1645 ntBASIC14.21□□□□□ -0.13
HHLA3Q9XRX5 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HHLA3Q9XRX5 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC14.21□□□□□ -0.13
HHLA3Q9XRX5 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC14.21□□□□□ -0.13
HHLA3Q9XRX5 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HHLA3Q9XRX5 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HHLA3Q9XRX5 H19-201ENST00000411754 1788 ntTSL 5 BASIC14.21□□□□□ -0.13
HHLA3Q9XRX5 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC14.21□□□□□ -0.13
HHLA3Q9XRX5 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
HHLA3Q9XRX5 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC14.21□□□□□ -0.14
HHLA3Q9XRX5 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.14
HHLA3Q9XRX5 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.14
HHLA3Q9XRX5 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
HHLA3Q9XRX5 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HHLA3Q9XRX5 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC14.2□□□□□ -0.14
HHLA3Q9XRX5 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
HHLA3Q9XRX5 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC14.2□□□□□ -0.14
HHLA3Q9XRX5 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC14.2□□□□□ -0.14
HHLA3Q9XRX5 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HHLA3Q9XRX5 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HHLA3Q9XRX5 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
HHLA3Q9XRX5 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HHLA3Q9XRX5 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
HHLA3Q9XRX5 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
HHLA3Q9XRX5 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HHLA3Q9XRX5 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
HHLA3Q9XRX5 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC14.2□□□□□ -0.14
HHLA3Q9XRX5 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
HHLA3Q9XRX5 METTL15-202ENST00000403099 795 ntTSL 5 BASIC14.2□□□□□ -0.14
HHLA3Q9XRX5 SERPINH1P1-201ENST00000419794 1249 ntBASIC14.2□□□□□ -0.14
HHLA3Q9XRX5 TK2-208ENST00000545043 1120 ntTSL 2 BASIC14.2□□□□□ -0.14
HHLA3Q9XRX5 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HHLA3Q9XRX5 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC14.2□□□□□ -0.14
HHLA3Q9XRX5 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HHLA3Q9XRX5 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HHLA3Q9XRX5 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
HHLA3Q9XRX5 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC14.2□□□□□ -0.14
HHLA3Q9XRX5 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC14.2□□□□□ -0.14
HHLA3Q9XRX5 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
HHLA3Q9XRX5 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
HHLA3Q9XRX5 KRT17P1-201ENST00000399211 1546 ntBASIC14.2□□□□□ -0.14
HHLA3Q9XRX5 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms