Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
COPS3Q9UNS2 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC17.33■□□□□ 0.36
COPS3Q9UNS2 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
COPS3Q9UNS2 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.33■□□□□ 0.36
COPS3Q9UNS2 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
COPS3Q9UNS2 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
COPS3Q9UNS2 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
COPS3Q9UNS2 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
COPS3Q9UNS2 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
COPS3Q9UNS2 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC17.33■□□□□ 0.36
COPS3Q9UNS2 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
COPS3Q9UNS2 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
COPS3Q9UNS2 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
COPS3Q9UNS2 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.33■□□□□ 0.36
COPS3Q9UNS2 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
COPS3Q9UNS2 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
COPS3Q9UNS2 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
COPS3Q9UNS2 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
COPS3Q9UNS2 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
COPS3Q9UNS2 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
COPS3Q9UNS2 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC17.32■□□□□ 0.36
COPS3Q9UNS2 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC17.32■□□□□ 0.36
COPS3Q9UNS2 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
COPS3Q9UNS2 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC17.32■□□□□ 0.36
COPS3Q9UNS2 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
COPS3Q9UNS2 NXN-202ENST00000537628 1340 ntTSL 3 BASIC17.32■□□□□ 0.36
COPS3Q9UNS2 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
COPS3Q9UNS2 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
COPS3Q9UNS2 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
COPS3Q9UNS2 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
COPS3Q9UNS2 SERP1-205ENST00000487153 657 ntTSL 4 BASIC17.32■□□□□ 0.36
COPS3Q9UNS2 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
COPS3Q9UNS2 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
COPS3Q9UNS2 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC17.32■□□□□ 0.36
COPS3Q9UNS2 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
COPS3Q9UNS2 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.32■□□□□ 0.36
COPS3Q9UNS2 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.32■□□□□ 0.36
COPS3Q9UNS2 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
COPS3Q9UNS2 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
COPS3Q9UNS2 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC17.32■□□□□ 0.36
COPS3Q9UNS2 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.32■□□□□ 0.36
COPS3Q9UNS2 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
COPS3Q9UNS2 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
COPS3Q9UNS2 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
COPS3Q9UNS2 AC116351.2-201ENST00000606540 1585 ntBASIC17.32■□□□□ 0.36
COPS3Q9UNS2 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
COPS3Q9UNS2 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
COPS3Q9UNS2 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
COPS3Q9UNS2 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
COPS3Q9UNS2 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
COPS3Q9UNS2 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
COPS3Q9UNS2 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
COPS3Q9UNS2 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
COPS3Q9UNS2 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
COPS3Q9UNS2 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
COPS3Q9UNS2 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
COPS3Q9UNS2 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
COPS3Q9UNS2 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
COPS3Q9UNS2 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC17.31■□□□□ 0.36
COPS3Q9UNS2 AL512625.2-201ENST00000417533 625 ntBASIC17.31■□□□□ 0.36
COPS3Q9UNS2 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
COPS3Q9UNS2 HES2-205ENST00000487437 968 ntTSL 3 BASIC17.31■□□□□ 0.36
COPS3Q9UNS2 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
COPS3Q9UNS2 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
COPS3Q9UNS2 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
COPS3Q9UNS2 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
COPS3Q9UNS2 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17.31■□□□□ 0.36
COPS3Q9UNS2 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC17.31■□□□□ 0.36
COPS3Q9UNS2 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
COPS3Q9UNS2 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
COPS3Q9UNS2 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC17.31■□□□□ 0.36
COPS3Q9UNS2 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
COPS3Q9UNS2 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC17.31■□□□□ 0.36
COPS3Q9UNS2 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.31■□□□□ 0.36
COPS3Q9UNS2 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC17.31■□□□□ 0.36
COPS3Q9UNS2 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
COPS3Q9UNS2 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
COPS3Q9UNS2 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
COPS3Q9UNS2 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
COPS3Q9UNS2 NEFHP1-201ENST00000412845 2629 ntBASIC17.3■□□□□ 0.36
COPS3Q9UNS2 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
COPS3Q9UNS2 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
COPS3Q9UNS2 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC17.3■□□□□ 0.36
COPS3Q9UNS2 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
COPS3Q9UNS2 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
COPS3Q9UNS2 GPX1P1-201ENST00000388829 606 ntBASIC17.3■□□□□ 0.36
COPS3Q9UNS2 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
COPS3Q9UNS2 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
COPS3Q9UNS2 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC17.3■□□□□ 0.36
COPS3Q9UNS2 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
COPS3Q9UNS2 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC17.3■□□□□ 0.36
COPS3Q9UNS2 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
COPS3Q9UNS2 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
COPS3Q9UNS2 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
COPS3Q9UNS2 AL161938.1-201ENST00000569833 2180 ntBASIC17.3■□□□□ 0.36
COPS3Q9UNS2 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
COPS3Q9UNS2 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
COPS3Q9UNS2 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
COPS3Q9UNS2 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC17.3■□□□□ 0.36
COPS3Q9UNS2 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms