Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CHD7Q9P2D1 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
CHD7Q9P2D1 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHD7Q9P2D1 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHD7Q9P2D1 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC20.71■□□□□ 0.91
CHD7Q9P2D1 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHD7Q9P2D1 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHD7Q9P2D1 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC20.71■□□□□ 0.91
CHD7Q9P2D1 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC20.71■□□□□ 0.91
CHD7Q9P2D1 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHD7Q9P2D1 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHD7Q9P2D1 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC20.71■□□□□ 0.91
CHD7Q9P2D1 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC20.71■□□□□ 0.91
CHD7Q9P2D1 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.71■□□□□ 0.91
CHD7Q9P2D1 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHD7Q9P2D1 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.71■□□□□ 0.91
CHD7Q9P2D1 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
CHD7Q9P2D1 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
CHD7Q9P2D1 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CHD7Q9P2D1 AL031008.1-201ENST00000619963 541 ntBASIC20.7■□□□□ 0.9
CHD7Q9P2D1 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHD7Q9P2D1 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
CHD7Q9P2D1 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
CHD7Q9P2D1 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CHD7Q9P2D1 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHD7Q9P2D1 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHD7Q9P2D1 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
CHD7Q9P2D1 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC20.7■□□□□ 0.9
CHD7Q9P2D1 PPIH-202ENST00000372549 327 ntTSL 3 BASIC20.7■□□□□ 0.9
CHD7Q9P2D1 AP002383.4-201ENST00000442518 975 ntBASIC20.7■□□□□ 0.9
CHD7Q9P2D1 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC20.7■□□□□ 0.9
CHD7Q9P2D1 DPP3P2-201ENST00000416030 1696 ntBASIC20.7■□□□□ 0.9
CHD7Q9P2D1 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHD7Q9P2D1 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CHD7Q9P2D1 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
CHD7Q9P2D1 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHD7Q9P2D1 AC133561.1-201ENST00000568600 2415 ntBASIC20.69■□□□□ 0.9
CHD7Q9P2D1 AC092597.1-201ENST00000487352 616 ntBASIC20.69■□□□□ 0.9
CHD7Q9P2D1 TBCB-205ENST00000585746 875 ntTSL 3 BASIC20.69■□□□□ 0.9
CHD7Q9P2D1 FGF14-AS2-201ENST00000606448 1074 ntBASIC20.69■□□□□ 0.9
CHD7Q9P2D1 TMEM179-206ENST00000616017 1645 ntBASIC20.69■□□□□ 0.9
CHD7Q9P2D1 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHD7Q9P2D1 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
CHD7Q9P2D1 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHD7Q9P2D1 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHD7Q9P2D1 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
CHD7Q9P2D1 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.69■□□□□ 0.9
CHD7Q9P2D1 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHD7Q9P2D1 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.68■□□□□ 0.9
CHD7Q9P2D1 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.68■□□□□ 0.9
CHD7Q9P2D1 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC20.68■□□□□ 0.9
CHD7Q9P2D1 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
CHD7Q9P2D1 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
CHD7Q9P2D1 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHD7Q9P2D1 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CHD7Q9P2D1 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.68■□□□□ 0.9
CHD7Q9P2D1 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHD7Q9P2D1 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHD7Q9P2D1 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHD7Q9P2D1 DERL1-203ENST00000419562 918 ntTSL 2 BASIC20.68■□□□□ 0.9
CHD7Q9P2D1 PRELID1P1-202ENST00000567272 903 ntBASIC20.68■□□□□ 0.9
CHD7Q9P2D1 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHD7Q9P2D1 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
CHD7Q9P2D1 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHD7Q9P2D1 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
CHD7Q9P2D1 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC20.67■□□□□ 0.9
CHD7Q9P2D1 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC20.67■□□□□ 0.9
CHD7Q9P2D1 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC20.67■□□□□ 0.9
CHD7Q9P2D1 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHD7Q9P2D1 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC20.67■□□□□ 0.9
CHD7Q9P2D1 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHD7Q9P2D1 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC20.67■□□□□ 0.9
CHD7Q9P2D1 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC20.67■□□□□ 0.9
CHD7Q9P2D1 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CHD7Q9P2D1 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CHD7Q9P2D1 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHD7Q9P2D1 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHD7Q9P2D1 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHD7Q9P2D1 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CHD7Q9P2D1 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CHD7Q9P2D1 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.67■□□□□ 0.9
CHD7Q9P2D1 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC20.67■□□□□ 0.9
CHD7Q9P2D1 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC20.67■□□□□ 0.9
CHD7Q9P2D1 AP002469.2-201ENST00000531724 424 ntBASIC20.67■□□□□ 0.9
CHD7Q9P2D1 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHD7Q9P2D1 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.66■□□□□ 0.9
CHD7Q9P2D1 PHGDH-210ENST00000641115 1638 ntBASIC20.66■□□□□ 0.9
CHD7Q9P2D1 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHD7Q9P2D1 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
CHD7Q9P2D1 ILF2-202ENST00000368681 726 ntTSL 2 BASIC20.66■□□□□ 0.9
CHD7Q9P2D1 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CHD7Q9P2D1 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
CHD7Q9P2D1 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
CHD7Q9P2D1 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CHD7Q9P2D1 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHD7Q9P2D1 TBC1D3P2-202ENST00000577902 1649 ntBASIC20.66■□□□□ 0.9
CHD7Q9P2D1 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHD7Q9P2D1 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC20.66■□□□□ 0.9
CHD7Q9P2D1 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHD7Q9P2D1 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms