Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC16.17■□□□□ 0.18
LIN7CQ9NUP9 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC16.17■□□□□ 0.18
LIN7CQ9NUP9 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
LIN7CQ9NUP9 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
LIN7CQ9NUP9 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
LIN7CQ9NUP9 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LIN7CQ9NUP9 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LIN7CQ9NUP9 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LIN7CQ9NUP9 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LIN7CQ9NUP9 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC16.17■□□□□ 0.18
LIN7CQ9NUP9 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LIN7CQ9NUP9 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
LIN7CQ9NUP9 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LIN7CQ9NUP9 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC16.17■□□□□ 0.18
LIN7CQ9NUP9 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LIN7CQ9NUP9 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC16.16■□□□□ 0.18
LIN7CQ9NUP9 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LIN7CQ9NUP9 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LIN7CQ9NUP9 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
LIN7CQ9NUP9 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
LIN7CQ9NUP9 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LIN7CQ9NUP9 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
LIN7CQ9NUP9 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LIN7CQ9NUP9 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
LIN7CQ9NUP9 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LIN7CQ9NUP9 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LIN7CQ9NUP9 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LIN7CQ9NUP9 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
LIN7CQ9NUP9 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
LIN7CQ9NUP9 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
LIN7CQ9NUP9 LINC01465-201ENST00000408887 1940 ntBASIC16.16■□□□□ 0.18
LIN7CQ9NUP9 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
LIN7CQ9NUP9 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
LIN7CQ9NUP9 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
LIN7CQ9NUP9 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LIN7CQ9NUP9 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
LIN7CQ9NUP9 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
LIN7CQ9NUP9 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
LIN7CQ9NUP9 AC069152.1-201ENST00000438030 544 ntBASIC16.16■□□□□ 0.18
LIN7CQ9NUP9 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC16.16■□□□□ 0.18
LIN7CQ9NUP9 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LIN7CQ9NUP9 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
LIN7CQ9NUP9 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
LIN7CQ9NUP9 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC16.16■□□□□ 0.18
LIN7CQ9NUP9 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC16.16■□□□□ 0.18
LIN7CQ9NUP9 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LIN7CQ9NUP9 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
LIN7CQ9NUP9 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LIN7CQ9NUP9 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC16.16■□□□□ 0.18
LIN7CQ9NUP9 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC16.16■□□□□ 0.18
LIN7CQ9NUP9 PHGDH-210ENST00000641115 1638 ntBASIC16.16■□□□□ 0.18
LIN7CQ9NUP9 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LIN7CQ9NUP9 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
LIN7CQ9NUP9 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
LIN7CQ9NUP9 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LIN7CQ9NUP9 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
LIN7CQ9NUP9 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
LIN7CQ9NUP9 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
LIN7CQ9NUP9 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LIN7CQ9NUP9 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
LIN7CQ9NUP9 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LIN7CQ9NUP9 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LIN7CQ9NUP9 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
LIN7CQ9NUP9 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LIN7CQ9NUP9 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC16.15■□□□□ 0.18
LIN7CQ9NUP9 PPP1R14BP2-201ENST00000426284 444 ntBASIC16.15■□□□□ 0.18
LIN7CQ9NUP9 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
LIN7CQ9NUP9 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC16.15■□□□□ 0.18
LIN7CQ9NUP9 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC16.15■□□□□ 0.18
LIN7CQ9NUP9 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LIN7CQ9NUP9 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LIN7CQ9NUP9 EMC9-206ENST00000560403 872 ntTSL 2 BASIC16.15■□□□□ 0.18
LIN7CQ9NUP9 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LIN7CQ9NUP9 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC16.15■□□□□ 0.18
LIN7CQ9NUP9 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LIN7CQ9NUP9 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LIN7CQ9NUP9 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LIN7CQ9NUP9 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LIN7CQ9NUP9 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC16.15■□□□□ 0.18
LIN7CQ9NUP9 NXN-202ENST00000537628 1340 ntTSL 3 BASIC16.15■□□□□ 0.18
LIN7CQ9NUP9 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LIN7CQ9NUP9 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LIN7CQ9NUP9 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LIN7CQ9NUP9 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
LIN7CQ9NUP9 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LIN7CQ9NUP9 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LIN7CQ9NUP9 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
LIN7CQ9NUP9 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
LIN7CQ9NUP9 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC16.14■□□□□ 0.17
LIN7CQ9NUP9 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
LIN7CQ9NUP9 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LIN7CQ9NUP9 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LIN7CQ9NUP9 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC16.14■□□□□ 0.17
LIN7CQ9NUP9 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
LIN7CQ9NUP9 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC16.14■□□□□ 0.17
LIN7CQ9NUP9 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC16.14■□□□□ 0.17
LIN7CQ9NUP9 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC16.14■□□□□ 0.17
LIN7CQ9NUP9 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
LIN7CQ9NUP9 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LIN7CQ9NUP9 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms