Protein–RNA interactions for Protein: Q9NRW7

VPS45, Vacuolar protein sorting-associated protein 45, humanhuman

Predictions only

Length 570 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45Q9NRW7 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
VPS45Q9NRW7 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.09■□□□□ 0.81
VPS45Q9NRW7 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
VPS45Q9NRW7 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
VPS45Q9NRW7 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
VPS45Q9NRW7 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC20.09■□□□□ 0.81
VPS45Q9NRW7 KRT16P5-201ENST00000455284 522 ntBASIC20.09■□□□□ 0.81
VPS45Q9NRW7 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC20.09■□□□□ 0.81
VPS45Q9NRW7 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC20.09■□□□□ 0.81
VPS45Q9NRW7 HES2-206ENST00000489730 730 ntTSL 2 BASIC20.09■□□□□ 0.81
VPS45Q9NRW7 NME3-204ENST00000563498 920 ntTSL 2 BASIC20.09■□□□□ 0.81
VPS45Q9NRW7 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
VPS45Q9NRW7 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.09■□□□□ 0.81
VPS45Q9NRW7 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
VPS45Q9NRW7 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
VPS45Q9NRW7 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.08■□□□□ 0.81
VPS45Q9NRW7 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
VPS45Q9NRW7 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.08■□□□□ 0.81
VPS45Q9NRW7 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.08■□□□□ 0.81
VPS45Q9NRW7 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
VPS45Q9NRW7 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
VPS45Q9NRW7 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20.08■□□□□ 0.81
VPS45Q9NRW7 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
VPS45Q9NRW7 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
VPS45Q9NRW7 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
VPS45Q9NRW7 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.08■□□□□ 0.81
VPS45Q9NRW7 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.08■□□□□ 0.81
VPS45Q9NRW7 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
VPS45Q9NRW7 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
VPS45Q9NRW7 AC005521.1-201ENST00000393351 872 ntBASIC20.08■□□□□ 0.81
VPS45Q9NRW7 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC20.08■□□□□ 0.81
VPS45Q9NRW7 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC20.08■□□□□ 0.81
VPS45Q9NRW7 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC20.08■□□□□ 0.81
VPS45Q9NRW7 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC20.08■□□□□ 0.81
VPS45Q9NRW7 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
VPS45Q9NRW7 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.08■□□□□ 0.8
VPS45Q9NRW7 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
VPS45Q9NRW7 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
VPS45Q9NRW7 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
VPS45Q9NRW7 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
VPS45Q9NRW7 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
VPS45Q9NRW7 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.07■□□□□ 0.8
VPS45Q9NRW7 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
VPS45Q9NRW7 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
VPS45Q9NRW7 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
VPS45Q9NRW7 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
VPS45Q9NRW7 CRAT-202ENST00000393384 973 ntTSL 2 BASIC20.07■□□□□ 0.8
VPS45Q9NRW7 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
VPS45Q9NRW7 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
VPS45Q9NRW7 FAM197Y1-201ENST00000421178 764 ntBASIC20.07■□□□□ 0.8
VPS45Q9NRW7 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC20.07■□□□□ 0.8
VPS45Q9NRW7 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
VPS45Q9NRW7 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
VPS45Q9NRW7 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC20.07■□□□□ 0.8
VPS45Q9NRW7 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC20.07■□□□□ 0.8
VPS45Q9NRW7 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC20.07■□□□□ 0.8
VPS45Q9NRW7 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC20.07■□□□□ 0.8
VPS45Q9NRW7 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.07■□□□□ 0.8
VPS45Q9NRW7 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
VPS45Q9NRW7 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
VPS45Q9NRW7 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
VPS45Q9NRW7 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
VPS45Q9NRW7 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
VPS45Q9NRW7 SRI-203ENST00000419179 1307 ntTSL 2 BASIC20.06■□□□□ 0.8
VPS45Q9NRW7 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC20.06■□□□□ 0.8
VPS45Q9NRW7 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC20.06■□□□□ 0.8
VPS45Q9NRW7 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
VPS45Q9NRW7 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
VPS45Q9NRW7 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.06■□□□□ 0.8
VPS45Q9NRW7 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
VPS45Q9NRW7 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
VPS45Q9NRW7 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
VPS45Q9NRW7 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC20.06■□□□□ 0.8
VPS45Q9NRW7 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC20.06■□□□□ 0.8
VPS45Q9NRW7 AC073195.1-201ENST00000607241 877 ntBASIC20.06■□□□□ 0.8
VPS45Q9NRW7 AL121829.2-201ENST00000620908 328 ntBASIC20.06■□□□□ 0.8
VPS45Q9NRW7 GLDC-219ENST00000640208 420 ntTSL 2 BASIC20.06■□□□□ 0.8
VPS45Q9NRW7 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
VPS45Q9NRW7 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
VPS45Q9NRW7 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
VPS45Q9NRW7 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC20.06■□□□□ 0.8
VPS45Q9NRW7 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
VPS45Q9NRW7 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
VPS45Q9NRW7 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
VPS45Q9NRW7 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC20.05■□□□□ 0.8
VPS45Q9NRW7 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
VPS45Q9NRW7 AC116351.2-201ENST00000606540 1585 ntBASIC20.05■□□□□ 0.8
VPS45Q9NRW7 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.05■□□□□ 0.8
VPS45Q9NRW7 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
VPS45Q9NRW7 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
VPS45Q9NRW7 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
VPS45Q9NRW7 CALM3-202ENST00000391918 702 ntTSL 2 BASIC20.05■□□□□ 0.8
VPS45Q9NRW7 AC113347.1-201ENST00000413321 391 ntBASIC20.05■□□□□ 0.8
VPS45Q9NRW7 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC20.05■□□□□ 0.8
VPS45Q9NRW7 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
VPS45Q9NRW7 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC20.05■□□□□ 0.8
VPS45Q9NRW7 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC20.05■□□□□ 0.8
VPS45Q9NRW7 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
VPS45Q9NRW7 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.05■□□□□ 0.8
VPS45Q9NRW7 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms