Protein–RNA interactions for Protein: Q99674

CGREF1, Cell growth regulator with EF hand domain protein 1, humanhuman

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1Q99674 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
CGREF1Q99674 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CGREF1Q99674 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
CGREF1Q99674 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.48■□□□□ 0.55
CGREF1Q99674 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.48■□□□□ 0.55
CGREF1Q99674 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CGREF1Q99674 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CGREF1Q99674 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC18.48■□□□□ 0.55
CGREF1Q99674 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CGREF1Q99674 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC18.47■□□□□ 0.55
CGREF1Q99674 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.47■□□□□ 0.55
CGREF1Q99674 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
CGREF1Q99674 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.47■□□□□ 0.55
CGREF1Q99674 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
CGREF1Q99674 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CGREF1Q99674 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CGREF1Q99674 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CGREF1Q99674 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CGREF1Q99674 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CGREF1Q99674 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CGREF1Q99674 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CGREF1Q99674 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CGREF1Q99674 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC18.47■□□□□ 0.55
CGREF1Q99674 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC18.47■□□□□ 0.55
CGREF1Q99674 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC18.47■□□□□ 0.55
CGREF1Q99674 HES2-205ENST00000487437 968 ntTSL 3 BASIC18.47■□□□□ 0.55
CGREF1Q99674 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC18.47■□□□□ 0.55
CGREF1Q99674 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC18.47■□□□□ 0.55
CGREF1Q99674 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CGREF1Q99674 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CGREF1Q99674 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CGREF1Q99674 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.47■□□□□ 0.55
CGREF1Q99674 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.47■□□□□ 0.55
CGREF1Q99674 AC010980.2-201ENST00000587099 1412 ntBASIC18.47■□□□□ 0.55
CGREF1Q99674 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.47■□□□□ 0.55
CGREF1Q99674 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CGREF1Q99674 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
CGREF1Q99674 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
CGREF1Q99674 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CGREF1Q99674 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CGREF1Q99674 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.47■□□□□ 0.55
CGREF1Q99674 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.47■□□□□ 0.55
CGREF1Q99674 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
CGREF1Q99674 AC006333.2-201ENST00000607957 2099 ntBASIC18.46■□□□□ 0.55
CGREF1Q99674 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
CGREF1Q99674 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CGREF1Q99674 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
CGREF1Q99674 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CGREF1Q99674 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CGREF1Q99674 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
CGREF1Q99674 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CGREF1Q99674 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CGREF1Q99674 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
CGREF1Q99674 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CGREF1Q99674 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CGREF1Q99674 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CGREF1Q99674 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.46■□□□□ 0.55
CGREF1Q99674 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
CGREF1Q99674 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.46■□□□□ 0.55
CGREF1Q99674 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CGREF1Q99674 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CGREF1Q99674 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CGREF1Q99674 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC18.46■□□□□ 0.55
CGREF1Q99674 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CGREF1Q99674 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC18.46■□□□□ 0.55
CGREF1Q99674 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
CGREF1Q99674 AC016769.1-201ENST00000409132 1010 ntBASIC18.46■□□□□ 0.55
CGREF1Q99674 APTR-203ENST00000430801 583 ntTSL 5 BASIC18.46■□□□□ 0.55
CGREF1Q99674 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CGREF1Q99674 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC18.46■□□□□ 0.55
CGREF1Q99674 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC18.46■□□□□ 0.55
CGREF1Q99674 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC18.46■□□□□ 0.55
CGREF1Q99674 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.46■□□□□ 0.55
CGREF1Q99674 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
CGREF1Q99674 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CGREF1Q99674 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CGREF1Q99674 NOC2LP1-202ENST00000452600 2235 ntBASIC18.46■□□□□ 0.55
CGREF1Q99674 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CGREF1Q99674 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CGREF1Q99674 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CGREF1Q99674 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
CGREF1Q99674 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.54
CGREF1Q99674 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.54
CGREF1Q99674 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.45■□□□□ 0.54
CGREF1Q99674 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
CGREF1Q99674 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CGREF1Q99674 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
CGREF1Q99674 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CGREF1Q99674 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CGREF1Q99674 KRT17P1-201ENST00000399211 1546 ntBASIC18.45■□□□□ 0.54
CGREF1Q99674 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CGREF1Q99674 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC18.45■□□□□ 0.54
CGREF1Q99674 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC18.45■□□□□ 0.54
CGREF1Q99674 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC18.45■□□□□ 0.54
CGREF1Q99674 PLD4-205ENST00000553861 667 ntTSL 2 BASIC18.45■□□□□ 0.54
CGREF1Q99674 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC18.45■□□□□ 0.54
CGREF1Q99674 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC18.45■□□□□ 0.54
CGREF1Q99674 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.45■□□□□ 0.54
CGREF1Q99674 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC18.45■□□□□ 0.54
CGREF1Q99674 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms