Protein–RNA interactions for Protein: Q96S86

HAPLN3, Hyaluronan and proteoglycan link protein 3, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HAPLN3Q96S86 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HAPLN3Q96S86 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
HAPLN3Q96S86 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC20.17■□□□□ 0.82
HAPLN3Q96S86 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC20.17■□□□□ 0.82
HAPLN3Q96S86 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC20.17■□□□□ 0.82
HAPLN3Q96S86 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
HAPLN3Q96S86 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
HAPLN3Q96S86 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HAPLN3Q96S86 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC20.17■□□□□ 0.82
HAPLN3Q96S86 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
HAPLN3Q96S86 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
HAPLN3Q96S86 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC20.17■□□□□ 0.82
HAPLN3Q96S86 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
HAPLN3Q96S86 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HAPLN3Q96S86 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
HAPLN3Q96S86 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HAPLN3Q96S86 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.16■□□□□ 0.82
HAPLN3Q96S86 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
HAPLN3Q96S86 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HAPLN3Q96S86 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HAPLN3Q96S86 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
HAPLN3Q96S86 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC20.16■□□□□ 0.82
HAPLN3Q96S86 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HAPLN3Q96S86 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
HAPLN3Q96S86 AL353807.1-201ENST00000427475 662 ntBASIC20.16■□□□□ 0.82
HAPLN3Q96S86 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
HAPLN3Q96S86 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
HAPLN3Q96S86 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC20.16■□□□□ 0.82
HAPLN3Q96S86 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC20.16■□□□□ 0.82
HAPLN3Q96S86 HTR7P1-201ENST00000538670 1336 ntBASIC20.16■□□□□ 0.82
HAPLN3Q96S86 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
HAPLN3Q96S86 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.16■□□□□ 0.82
HAPLN3Q96S86 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
HAPLN3Q96S86 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HAPLN3Q96S86 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC20.16■□□□□ 0.82
HAPLN3Q96S86 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
HAPLN3Q96S86 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
HAPLN3Q96S86 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
HAPLN3Q96S86 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HAPLN3Q96S86 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HAPLN3Q96S86 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
HAPLN3Q96S86 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC20.15■□□□□ 0.82
HAPLN3Q96S86 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HAPLN3Q96S86 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
HAPLN3Q96S86 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC20.15■□□□□ 0.82
HAPLN3Q96S86 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HAPLN3Q96S86 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
HAPLN3Q96S86 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC20.15■□□□□ 0.82
HAPLN3Q96S86 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC20.15■□□□□ 0.82
HAPLN3Q96S86 AL353708.3-201ENST00000610272 989 ntBASIC20.15■□□□□ 0.82
HAPLN3Q96S86 MME-217ENST00000616757 1315 ntTSL 5 BASIC20.15■□□□□ 0.82
HAPLN3Q96S86 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
HAPLN3Q96S86 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HAPLN3Q96S86 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC20.15■□□□□ 0.82
HAPLN3Q96S86 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
HAPLN3Q96S86 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC20.15■□□□□ 0.82
HAPLN3Q96S86 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
HAPLN3Q96S86 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.15■□□□□ 0.82
HAPLN3Q96S86 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HAPLN3Q96S86 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
HAPLN3Q96S86 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HAPLN3Q96S86 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
HAPLN3Q96S86 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HAPLN3Q96S86 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
HAPLN3Q96S86 PWWP2AP1-201ENST00000429776 2273 ntBASIC20.14■□□□□ 0.81
HAPLN3Q96S86 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.14■□□□□ 0.81
HAPLN3Q96S86 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
HAPLN3Q96S86 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC20.14■□□□□ 0.81
HAPLN3Q96S86 AL135905.2-201ENST00000584934 1404 ntBASIC20.14■□□□□ 0.81
HAPLN3Q96S86 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
HAPLN3Q96S86 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
HAPLN3Q96S86 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC20.14■□□□□ 0.81
HAPLN3Q96S86 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC20.14■□□□□ 0.81
HAPLN3Q96S86 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
HAPLN3Q96S86 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC20.14■□□□□ 0.81
HAPLN3Q96S86 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC20.14■□□□□ 0.81
HAPLN3Q96S86 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC20.14■□□□□ 0.81
HAPLN3Q96S86 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
HAPLN3Q96S86 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
HAPLN3Q96S86 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
HAPLN3Q96S86 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
HAPLN3Q96S86 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
HAPLN3Q96S86 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.14■□□□□ 0.81
HAPLN3Q96S86 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
HAPLN3Q96S86 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
HAPLN3Q96S86 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
HAPLN3Q96S86 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.13■□□□□ 0.81
HAPLN3Q96S86 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
HAPLN3Q96S86 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
HAPLN3Q96S86 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
HAPLN3Q96S86 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC20.13■□□□□ 0.81
HAPLN3Q96S86 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
HAPLN3Q96S86 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC20.13■□□□□ 0.81
HAPLN3Q96S86 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
HAPLN3Q96S86 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
HAPLN3Q96S86 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC20.13■□□□□ 0.81
HAPLN3Q96S86 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
HAPLN3Q96S86 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
HAPLN3Q96S86 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
HAPLN3Q96S86 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms