Protein–RNA interactions for Protein: Q96MD7

C9orf85, Uncharacterized protein C9orf85, humanhuman

Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85Q96MD7 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
C9orf85Q96MD7 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
C9orf85Q96MD7 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
C9orf85Q96MD7 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC14.09□□□□□ -0.15
C9orf85Q96MD7 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
C9orf85Q96MD7 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
C9orf85Q96MD7 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC14.09□□□□□ -0.15
C9orf85Q96MD7 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
C9orf85Q96MD7 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
C9orf85Q96MD7 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
C9orf85Q96MD7 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC14.09□□□□□ -0.15
C9orf85Q96MD7 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
C9orf85Q96MD7 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
C9orf85Q96MD7 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
C9orf85Q96MD7 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
C9orf85Q96MD7 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC14.09□□□□□ -0.15
C9orf85Q96MD7 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC14.09□□□□□ -0.15
C9orf85Q96MD7 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
C9orf85Q96MD7 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
C9orf85Q96MD7 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
C9orf85Q96MD7 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC14.08□□□□□ -0.15
C9orf85Q96MD7 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
C9orf85Q96MD7 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
C9orf85Q96MD7 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
C9orf85Q96MD7 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
C9orf85Q96MD7 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC14.08□□□□□ -0.16
C9orf85Q96MD7 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC14.08□□□□□ -0.16
C9orf85Q96MD7 CROCCP3-202ENST00000420820 1947 ntBASIC14.08□□□□□ -0.16
C9orf85Q96MD7 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC14.08□□□□□ -0.16
C9orf85Q96MD7 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
C9orf85Q96MD7 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.16
C9orf85Q96MD7 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
C9orf85Q96MD7 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
C9orf85Q96MD7 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
C9orf85Q96MD7 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC14.08□□□□□ -0.16
C9orf85Q96MD7 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
C9orf85Q96MD7 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC14.08□□□□□ -0.16
C9orf85Q96MD7 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
C9orf85Q96MD7 AC026185.1-201ENST00000445748 174 ntBASIC14.08□□□□□ -0.16
C9orf85Q96MD7 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC14.08□□□□□ -0.16
C9orf85Q96MD7 OAS3-207ENST00000551007 998 ntTSL 2 BASIC14.08□□□□□ -0.16
C9orf85Q96MD7 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC14.08□□□□□ -0.16
C9orf85Q96MD7 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
C9orf85Q96MD7 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
C9orf85Q96MD7 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
C9orf85Q96MD7 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
C9orf85Q96MD7 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
C9orf85Q96MD7 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
C9orf85Q96MD7 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC14.08□□□□□ -0.16
C9orf85Q96MD7 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
C9orf85Q96MD7 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
C9orf85Q96MD7 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC14.08□□□□□ -0.16
C9orf85Q96MD7 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
C9orf85Q96MD7 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
C9orf85Q96MD7 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
C9orf85Q96MD7 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
C9orf85Q96MD7 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
C9orf85Q96MD7 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
C9orf85Q96MD7 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
C9orf85Q96MD7 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
C9orf85Q96MD7 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
C9orf85Q96MD7 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
C9orf85Q96MD7 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC14.07□□□□□ -0.16
C9orf85Q96MD7 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
C9orf85Q96MD7 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
C9orf85Q96MD7 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
C9orf85Q96MD7 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC14.07□□□□□ -0.16
C9orf85Q96MD7 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC14.07□□□□□ -0.16
C9orf85Q96MD7 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
C9orf85Q96MD7 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC14.07□□□□□ -0.16
C9orf85Q96MD7 OR2A1-AS1-201ENST00000462305 773 ntBASIC14.07□□□□□ -0.16
C9orf85Q96MD7 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC14.07□□□□□ -0.16
C9orf85Q96MD7 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC14.07□□□□□ -0.16
C9orf85Q96MD7 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC14.07□□□□□ -0.16
C9orf85Q96MD7 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC14.07□□□□□ -0.16
C9orf85Q96MD7 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC14.07□□□□□ -0.16
C9orf85Q96MD7 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC14.07□□□□□ -0.16
C9orf85Q96MD7 MAX-217ENST00000557277 728 ntTSL 3 BASIC14.07□□□□□ -0.16
C9orf85Q96MD7 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
C9orf85Q96MD7 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC14.07□□□□□ -0.16
C9orf85Q96MD7 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC14.07□□□□□ -0.16
C9orf85Q96MD7 RAP2CP1-201ENST00000605103 478 ntBASIC14.07□□□□□ -0.16
C9orf85Q96MD7 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
C9orf85Q96MD7 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC14.07□□□□□ -0.16
C9orf85Q96MD7 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
C9orf85Q96MD7 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC14.07□□□□□ -0.16
C9orf85Q96MD7 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
C9orf85Q96MD7 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
C9orf85Q96MD7 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
C9orf85Q96MD7 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
C9orf85Q96MD7 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC14.07□□□□□ -0.16
C9orf85Q96MD7 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
C9orf85Q96MD7 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
C9orf85Q96MD7 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC14.07□□□□□ -0.16
C9orf85Q96MD7 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
C9orf85Q96MD7 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
C9orf85Q96MD7 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
C9orf85Q96MD7 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
C9orf85Q96MD7 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC14.07□□□□□ -0.16
C9orf85Q96MD7 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms