Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
CKAP2Q8WWK9 AL512353.2-201ENST00000448759 1962 ntBASIC19.35■□□□□ 0.69
CKAP2Q8WWK9 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CKAP2Q8WWK9 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
CKAP2Q8WWK9 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CKAP2Q8WWK9 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.35■□□□□ 0.69
CKAP2Q8WWK9 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.35■□□□□ 0.69
CKAP2Q8WWK9 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CKAP2Q8WWK9 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CKAP2Q8WWK9 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC19.34■□□□□ 0.69
CKAP2Q8WWK9 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
CKAP2Q8WWK9 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CKAP2Q8WWK9 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CKAP2Q8WWK9 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CKAP2Q8WWK9 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
CKAP2Q8WWK9 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CKAP2Q8WWK9 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CKAP2Q8WWK9 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC19.34■□□□□ 0.69
CKAP2Q8WWK9 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CKAP2Q8WWK9 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.34■□□□□ 0.69
CKAP2Q8WWK9 MIR638-201ENST00000385237 100 ntBASIC19.34■□□□□ 0.69
CKAP2Q8WWK9 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CKAP2Q8WWK9 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.34■□□□□ 0.69
CKAP2Q8WWK9 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC19.34■□□□□ 0.69
CKAP2Q8WWK9 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
CKAP2Q8WWK9 AL136967.2-201ENST00000623968 743 ntBASIC19.34■□□□□ 0.69
CKAP2Q8WWK9 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CKAP2Q8WWK9 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CKAP2Q8WWK9 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CKAP2Q8WWK9 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC19.34■□□□□ 0.69
CKAP2Q8WWK9 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.34■□□□□ 0.69
CKAP2Q8WWK9 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CKAP2Q8WWK9 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
CKAP2Q8WWK9 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
CKAP2Q8WWK9 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC19.34■□□□□ 0.69
CKAP2Q8WWK9 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CKAP2Q8WWK9 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
CKAP2Q8WWK9 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
CKAP2Q8WWK9 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
CKAP2Q8WWK9 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CKAP2Q8WWK9 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CKAP2Q8WWK9 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
CKAP2Q8WWK9 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
CKAP2Q8WWK9 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CKAP2Q8WWK9 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.33■□□□□ 0.68
CKAP2Q8WWK9 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CKAP2Q8WWK9 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.33■□□□□ 0.68
CKAP2Q8WWK9 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC19.33■□□□□ 0.68
CKAP2Q8WWK9 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CKAP2Q8WWK9 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CKAP2Q8WWK9 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CKAP2Q8WWK9 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
CKAP2Q8WWK9 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.33■□□□□ 0.68
CKAP2Q8WWK9 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CKAP2Q8WWK9 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CKAP2Q8WWK9 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CKAP2Q8WWK9 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CKAP2Q8WWK9 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CKAP2Q8WWK9 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CKAP2Q8WWK9 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.32■□□□□ 0.68
CKAP2Q8WWK9 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CKAP2Q8WWK9 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CKAP2Q8WWK9 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CKAP2Q8WWK9 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CKAP2Q8WWK9 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC19.32■□□□□ 0.68
CKAP2Q8WWK9 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.32■□□□□ 0.68
CKAP2Q8WWK9 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CKAP2Q8WWK9 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CKAP2Q8WWK9 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC19.32■□□□□ 0.68
CKAP2Q8WWK9 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CKAP2Q8WWK9 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.32■□□□□ 0.68
CKAP2Q8WWK9 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CKAP2Q8WWK9 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CKAP2Q8WWK9 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
CKAP2Q8WWK9 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CKAP2Q8WWK9 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.32■□□□□ 0.68
CKAP2Q8WWK9 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CKAP2Q8WWK9 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
CKAP2Q8WWK9 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CKAP2Q8WWK9 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CKAP2Q8WWK9 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
CKAP2Q8WWK9 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CKAP2Q8WWK9 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC19.32■□□□□ 0.68
CKAP2Q8WWK9 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CKAP2Q8WWK9 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC19.31■□□□□ 0.68
CKAP2Q8WWK9 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CKAP2Q8WWK9 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CKAP2Q8WWK9 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
CKAP2Q8WWK9 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC19.31■□□□□ 0.68
CKAP2Q8WWK9 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC19.31■□□□□ 0.68
CKAP2Q8WWK9 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CKAP2Q8WWK9 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CKAP2Q8WWK9 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CKAP2Q8WWK9 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CKAP2Q8WWK9 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CKAP2Q8WWK9 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CKAP2Q8WWK9 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CKAP2Q8WWK9 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CKAP2Q8WWK9 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
CKAP2Q8WWK9 HLA-G-202ENST00000376815 851 ntBASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms