Protein–RNA interactions for Protein: Q8TEC5

SH3RF2, Putative E3 ubiquitin-protein ligase SH3RF2, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF2Q8TEC5 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC20.22■□□□□ 0.83
SH3RF2Q8TEC5 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC20.22■□□□□ 0.83
SH3RF2Q8TEC5 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC20.22■□□□□ 0.83
SH3RF2Q8TEC5 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC20.22■□□□□ 0.83
SH3RF2Q8TEC5 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SH3RF2Q8TEC5 P4HB-223ENST00000576390 439 ntTSL 4 BASIC20.22■□□□□ 0.83
SH3RF2Q8TEC5 AP005242.2-201ENST00000580065 1175 ntBASIC20.22■□□□□ 0.83
SH3RF2Q8TEC5 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SH3RF2Q8TEC5 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC20.22■□□□□ 0.83
SH3RF2Q8TEC5 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.22■□□□□ 0.83
SH3RF2Q8TEC5 GOLGA2P11-201ENST00000562660 1621 ntBASIC20.22■□□□□ 0.83
SH3RF2Q8TEC5 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SH3RF2Q8TEC5 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SH3RF2Q8TEC5 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SH3RF2Q8TEC5 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SH3RF2Q8TEC5 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.22■□□□□ 0.83
SH3RF2Q8TEC5 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.22■□□□□ 0.83
SH3RF2Q8TEC5 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SH3RF2Q8TEC5 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SH3RF2Q8TEC5 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SH3RF2Q8TEC5 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SH3RF2Q8TEC5 RCC2P6-201ENST00000526625 1557 ntBASIC20.21■□□□□ 0.83
SH3RF2Q8TEC5 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
SH3RF2Q8TEC5 KRT8P8-201ENST00000434750 1448 ntBASIC20.21■□□□□ 0.83
SH3RF2Q8TEC5 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC20.21■□□□□ 0.83
SH3RF2Q8TEC5 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SH3RF2Q8TEC5 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SH3RF2Q8TEC5 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
SH3RF2Q8TEC5 CRYGFP-201ENST00000418459 633 ntBASIC20.21■□□□□ 0.83
SH3RF2Q8TEC5 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC20.21■□□□□ 0.83
SH3RF2Q8TEC5 AC097488.1-201ENST00000507834 756 ntBASIC20.21■□□□□ 0.83
SH3RF2Q8TEC5 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC20.21■□□□□ 0.83
SH3RF2Q8TEC5 AC092865.7-201ENST00000641832 219 ntBASIC20.21■□□□□ 0.83
SH3RF2Q8TEC5 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SH3RF2Q8TEC5 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SH3RF2Q8TEC5 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
SH3RF2Q8TEC5 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
SH3RF2Q8TEC5 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SH3RF2Q8TEC5 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
SH3RF2Q8TEC5 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
SH3RF2Q8TEC5 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SH3RF2Q8TEC5 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SH3RF2Q8TEC5 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SH3RF2Q8TEC5 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
SH3RF2Q8TEC5 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.2■□□□□ 0.82
SH3RF2Q8TEC5 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SH3RF2Q8TEC5 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SH3RF2Q8TEC5 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SH3RF2Q8TEC5 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SH3RF2Q8TEC5 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC20.2■□□□□ 0.82
SH3RF2Q8TEC5 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.2■□□□□ 0.82
SH3RF2Q8TEC5 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC20.2■□□□□ 0.82
SH3RF2Q8TEC5 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC20.2■□□□□ 0.82
SH3RF2Q8TEC5 TMA16-209ENST00000513272 803 ntTSL 2 BASIC20.2■□□□□ 0.82
SH3RF2Q8TEC5 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC20.2■□□□□ 0.82
SH3RF2Q8TEC5 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC20.2■□□□□ 0.82
SH3RF2Q8TEC5 AC011298.2-201ENST00000617989 482 ntBASIC20.2■□□□□ 0.82
SH3RF2Q8TEC5 AC130371.2-201ENST00000619443 611 ntBASIC20.2■□□□□ 0.82
SH3RF2Q8TEC5 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SH3RF2Q8TEC5 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SH3RF2Q8TEC5 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SH3RF2Q8TEC5 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.2■□□□□ 0.82
SH3RF2Q8TEC5 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC20.2■□□□□ 0.82
SH3RF2Q8TEC5 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.19■□□□□ 0.82
SH3RF2Q8TEC5 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
SH3RF2Q8TEC5 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.19■□□□□ 0.82
SH3RF2Q8TEC5 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SH3RF2Q8TEC5 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SH3RF2Q8TEC5 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
SH3RF2Q8TEC5 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.19■□□□□ 0.82
SH3RF2Q8TEC5 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SH3RF2Q8TEC5 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
SH3RF2Q8TEC5 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.19■□□□□ 0.82
SH3RF2Q8TEC5 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.19■□□□□ 0.82
SH3RF2Q8TEC5 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SH3RF2Q8TEC5 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
SH3RF2Q8TEC5 PRR31-201ENST00000371629 978 ntTSL 2 BASIC20.19■□□□□ 0.82
SH3RF2Q8TEC5 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC20.19■□□□□ 0.82
SH3RF2Q8TEC5 AC113347.1-201ENST00000413321 391 ntBASIC20.19■□□□□ 0.82
SH3RF2Q8TEC5 AC008040.2-201ENST00000461049 708 ntBASIC20.19■□□□□ 0.82
SH3RF2Q8TEC5 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC20.19■□□□□ 0.82
SH3RF2Q8TEC5 C2orf69P3-201ENST00000565542 1120 ntBASIC20.19■□□□□ 0.82
SH3RF2Q8TEC5 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
SH3RF2Q8TEC5 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SH3RF2Q8TEC5 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
SH3RF2Q8TEC5 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SH3RF2Q8TEC5 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC20.19■□□□□ 0.82
SH3RF2Q8TEC5 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.19■□□□□ 0.82
SH3RF2Q8TEC5 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SH3RF2Q8TEC5 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.19■□□□□ 0.82
SH3RF2Q8TEC5 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SH3RF2Q8TEC5 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.18■□□□□ 0.82
SH3RF2Q8TEC5 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
SH3RF2Q8TEC5 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20.18■□□□□ 0.82
SH3RF2Q8TEC5 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SH3RF2Q8TEC5 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SH3RF2Q8TEC5 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
SH3RF2Q8TEC5 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC20.18■□□□□ 0.82
SH3RF2Q8TEC5 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SH3RF2Q8TEC5 AC004951.3-201ENST00000418645 1148 ntBASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms