Protein–RNA interactions for Protein: Q8TC41

RNF217, Probable E3 ubiquitin-protein ligase RNF217, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF217Q8TC41 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.67■□□□□ 0.58
RNF217Q8TC41 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RNF217Q8TC41 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.67■□□□□ 0.58
RNF217Q8TC41 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
RNF217Q8TC41 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RNF217Q8TC41 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.67■□□□□ 0.58
RNF217Q8TC41 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF217Q8TC41 PARP1-202ENST00000366792 553 ntTSL 3 BASIC18.67■□□□□ 0.58
RNF217Q8TC41 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
RNF217Q8TC41 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC18.67■□□□□ 0.58
RNF217Q8TC41 AC007322.3-201ENST00000426526 701 ntBASIC18.67■□□□□ 0.58
RNF217Q8TC41 AC034268.1-201ENST00000441047 882 ntBASIC18.67■□□□□ 0.58
RNF217Q8TC41 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC18.67■□□□□ 0.58
RNF217Q8TC41 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
RNF217Q8TC41 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RNF217Q8TC41 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RNF217Q8TC41 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF217Q8TC41 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF217Q8TC41 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
RNF217Q8TC41 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
RNF217Q8TC41 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.67■□□□□ 0.58
RNF217Q8TC41 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF217Q8TC41 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
RNF217Q8TC41 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
RNF217Q8TC41 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
RNF217Q8TC41 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF217Q8TC41 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF217Q8TC41 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF217Q8TC41 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
RNF217Q8TC41 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.66■□□□□ 0.58
RNF217Q8TC41 RBM17P2-201ENST00000616397 1405 ntBASIC18.66■□□□□ 0.58
RNF217Q8TC41 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF217Q8TC41 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF217Q8TC41 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RNF217Q8TC41 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.66■□□□□ 0.58
RNF217Q8TC41 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RNF217Q8TC41 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.66■□□□□ 0.58
RNF217Q8TC41 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
RNF217Q8TC41 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.66■□□□□ 0.58
RNF217Q8TC41 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
RNF217Q8TC41 HACD1-201ENST00000326961 773 ntTSL 2 BASIC18.66■□□□□ 0.58
RNF217Q8TC41 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RNF217Q8TC41 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
RNF217Q8TC41 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF217Q8TC41 BMP1-204ENST00000397814 836 ntTSL 4 BASIC18.66■□□□□ 0.58
RNF217Q8TC41 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC18.66■□□□□ 0.58
RNF217Q8TC41 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RNF217Q8TC41 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC18.66■□□□□ 0.58
RNF217Q8TC41 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF217Q8TC41 BOC-212ENST00000485230 2173 ntTSL 2 BASIC18.66■□□□□ 0.58
RNF217Q8TC41 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC18.66■□□□□ 0.58
RNF217Q8TC41 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.66■□□□□ 0.58
RNF217Q8TC41 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.66■□□□□ 0.58
RNF217Q8TC41 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF217Q8TC41 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RNF217Q8TC41 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF217Q8TC41 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
RNF217Q8TC41 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF217Q8TC41 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RNF217Q8TC41 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF217Q8TC41 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.66■□□□□ 0.58
RNF217Q8TC41 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF217Q8TC41 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
RNF217Q8TC41 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
RNF217Q8TC41 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RNF217Q8TC41 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC18.65■□□□□ 0.58
RNF217Q8TC41 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF217Q8TC41 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF217Q8TC41 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF217Q8TC41 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RNF217Q8TC41 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF217Q8TC41 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
RNF217Q8TC41 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RNF217Q8TC41 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
RNF217Q8TC41 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RNF217Q8TC41 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
RNF217Q8TC41 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
RNF217Q8TC41 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC18.65■□□□□ 0.58
RNF217Q8TC41 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC18.65■□□□□ 0.58
RNF217Q8TC41 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC18.65■□□□□ 0.58
RNF217Q8TC41 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RNF217Q8TC41 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF217Q8TC41 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF217Q8TC41 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF217Q8TC41 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RNF217Q8TC41 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF217Q8TC41 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF217Q8TC41 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF217Q8TC41 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF217Q8TC41 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
RNF217Q8TC41 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
RNF217Q8TC41 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
RNF217Q8TC41 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
RNF217Q8TC41 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
RNF217Q8TC41 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.64■□□□□ 0.58
RNF217Q8TC41 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF217Q8TC41 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
RNF217Q8TC41 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF217Q8TC41 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF217Q8TC41 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms